The 2.0 version of rSNPBase

Variant report

Variant rs9402028
Chromosome Location chr6:128558281-128558282
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128488200-128565200 Weak transcription Fetal Stomach stomach
2 chr6:128492600-128567800 Weak transcription Ovary ovary
3 chr6:128506000-128561000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:128520400-128573800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr6:128522000-128560800 Weak transcription Primary T cells from cord blood blood
6 chr6:128527600-128561000 Weak transcription Esophagus oesophagus
7 chr6:128528200-128558400 Weak transcription Brain Cingulate Gyrus brain
8 chr6:128528400-128561000 Weak transcription Fetal Brain Male brain
9 chr6:128529800-128561000 Weak transcription Stomach Smooth Muscle stomach
10 chr6:128531000-128562400 Weak transcription Aorta Aorta
11 chr6:128531200-128562400 Weak transcription HSMMtube muscle
12 chr6:128531200-128567800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr6:128531200-128573800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:128532000-128561000 Weak transcription Osteobl bone
15 chr6:128536800-128560600 Weak transcription Fetal Lung lung
16 chr6:128537200-128561000 Weak transcription Fetal Muscle Leg muscle
17 chr6:128537600-128573800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:128540200-128559600 Weak transcription Primary B cells from peripheral blood blood
19 chr6:128540200-128561000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:128540200-128564800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr6:128540400-128560400 Weak transcription Fetal Thymus thymus
22 chr6:128540400-128560400 Weak transcription HUVEC blood vessel
23 chr6:128540400-128569400 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr6:128540600-128561000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:128540800-128562400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr6:128544200-128562400 Weak transcription Gastric stomach
27 chr6:128544200-128563200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:128548400-128558400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr6:128551400-128558400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr6:128551400-128561000 Weak transcription Right Atrium heart
31 chr6:128551400-128565800 Weak transcription Psoas Muscle Psoas
32 chr6:128551400-128584400 Weak transcription Pancreas Pancrea
33 chr6:128551600-128558400 Weak transcription Brain Anterior Caudate brain
34 chr6:128552600-128560400 Weak transcription Fetal Intestine Large intestine
35 chr6:128552600-128562400 Weak transcription Fetal Intestine Small intestine
36 chr6:128553200-128573800 Weak transcription NHLF lung
37 chr6:128553400-128564400 Weak transcription Lung lung
38 chr6:128553800-128561000 Weak transcription Duodenum Mucosa Duodenum
39 chr6:128553800-128570600 Weak transcription Liver Liver
40 chr6:128554000-128561000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:128554600-128564200 Weak transcription Muscle Satellite Cultured Cells --
42 chr6:128555000-128561000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:128555000-128564400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:128555200-128558400 Weak transcription Brain Hippocampus Middle brain
45 chr6:128555200-128558400 Weak transcription Brain Substantia Nigra brain
46 chr6:128555200-128561000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:128555200-128561000 Weak transcription Right Ventricle heart
48 chr6:128555200-128584400 Weak transcription HMEC breast
49 chr6:128555400-128558400 Weak transcription Brain Angular Gyrus brain
50 chr6:128555600-128595800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015