Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:59210973..59213100-chr1:59247438..59249913,3	K562	blood:
2	chr1:59211377..59213683-chr1:59215503..59217817,3	K562	blood:

Variant related genes	Relation type
ENSG00000177606	Chromatin interaction

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2760486	0.80[CEU][hapmap]
rs999157	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754829	chr1:59197556-59215791	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59206200-59214200	Weak transcription	Fetal Kidney	kidney
2	chr1:59206200-59221000	Weak transcription	Fetal Intestine Small	intestine
3	chr1:59207600-59220000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr1:59207800-59220000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr1:59207800-59220000	Weak transcription	Psoas Muscle	Psoas
6	chr1:59208000-59215000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr1:59210600-59212600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr1:59210800-59211800	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr1:59210800-59212200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr1:59210800-59212600	Enhancers	NHEK	skin
11	chr1:59210800-59212800	Enhancers	HMEC	breast
12	chr1:59211000-59212600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr1:59211200-59212600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr1:59211200-59212600	Enhancers	NH-A	brain
15	chr1:59211200-59212800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr1:59211200-59212800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr1:59211200-59213000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr1:59211400-59213200	Enhancers	HepG2	liver
19	chr1:59211600-59212800	Enhancers	HSMM	muscle
20	chr1:59211600-59218200	Weak transcription	NHDF-Ad	bronchial
21	chr1:59211600-59221000	Weak transcription	Stomach Mucosa	stomach

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