Variant report

Variant rs943843
Chromosome Location chr9:117349401-117349402
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117344800-117349600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr9:117346200-117349600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr9:117349000-117349600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr9:117349000-117350800 Active TSS Rectal Smooth Muscle rectum
5 chr9:117349200-117349600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
6 chr9:117349200-117349600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
7 chr9:117349200-117349600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr9:117349200-117349600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr9:117349200-117349600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
10 chr9:117349200-117349600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr9:117349200-117349600 Flanking Active TSS Fetal Intestine Large intestine
12 chr9:117349200-117349600 Flanking Active TSS Fetal Stomach stomach
13 chr9:117349200-117349600 Flanking Active TSS A549 lung
14 chr9:117349200-117349800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:117349200-117349800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
16 chr9:117349200-117349800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
17 chr9:117349200-117349800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
18 chr9:117349200-117349800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
19 chr9:117349200-117349800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr9:117349200-117349800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr9:117349200-117349800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:117349200-117349800 Flanking Active TSS Adipose Nuclei Adipose
23 chr9:117349200-117349800 Flanking Active TSS Fetal Brain Male brain
24 chr9:117349200-117349800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
25 chr9:117349200-117349800 Flanking Active TSS Stomach Smooth Muscle stomach
26 chr9:117349200-117349800 Flanking Active TSS Dnd41 blood
27 chr9:117349200-117349800 Flanking Active TSS Hela-S3 cervix
28 chr9:117349200-117349800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
29 chr9:117349200-117350200 Active TSS Brain Germinal Matrix brain
30 chr9:117349200-117350800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr9:117349200-117350800 Active TSS Fetal Lung lung
32 chr9:117349200-117350800 Active TSS Rectal Mucosa Donor 29 rectum
33 chr9:117349200-117350800 Active TSS Rectal Mucosa Donor 31 rectum
34 chr9:117349200-117351000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr9:117349200-117351000 Active TSS Brain Hippocampus Middle brain
36 chr9:117349200-117351000 Active TSS Colon Smooth Muscle Colon
37 chr9:117349200-117351000 Active TSS Duodenum Smooth Muscle Duodenum
38 chr9:117349200-117351000 Active TSS Fetal Kidney kidney
39 chr9:117349200-117351200 Active TSS Fetal Intestine Small intestine
40 chr9:117349200-117351400 Active TSS ES-I3 Cell Line embryonic stem cell
41 chr9:117349200-117351600 Active TSS Pancreatic Islets Pancreatic Islet
42 chr9:117349200-117351800 Active TSS Colonic Mucosa Colon
43 chr9:117349400-117349600 Flanking Active TSS H1 Cell Line embryonic stem cell
44 chr9:117349400-117349600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr9:117349400-117349600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
46 chr9:117349400-117349600 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr9:117349400-117349600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
48 chr9:117349400-117349600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
49 chr9:117349400-117349600 Active TSS Primary mononuclear cells fromperipheralblood Blood
50 chr9:117349400-117349600 Flanking Active TSS Brain Cingulate Gyrus brain

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