Variant report

Variant	rs9443837
Chromosome Location	chr6:81572667-81572668
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12333152	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12333277	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1460186	1.00[AMR][1000 genomes]
rs16892458	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16892604	1.00[EUR][1000 genomes]
rs16892651	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4351211	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4351212	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4470815	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4543324	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55908144	1.00[EUR][1000 genomes]
rs56790428	1.00[EUR][1000 genomes]
rs6901453	1.00[EUR][1000 genomes]
rs6940665	1.00[EUR][1000 genomes]
rs73463365	1.00[EUR][1000 genomes]
rs73471358	1.00[EUR][1000 genomes]
rs9443847	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449173	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449180	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449181	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449183	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531333	chr6:81042427-81836484	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv886315	chr6:81352515-81946866	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv886318	chr6:81447367-81769538	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv517853	chr6:81529339-81607383	Enhancers ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
5	nsv1020546	chr6:81536002-81616792	Enhancers ZNF genes & repeats Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv2763957	chr6:81567637-81656379	Enhancers ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv1032130	chr6:81572030-81722231	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81572400-81573000	Active TSS	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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