Variant report

Variant	rs9450789
Chromosome Location	chr6:88451382-88451383
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs9444523	1.00[EUR][1000 genomes]
rs9444545	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9444546	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9444547	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9444548	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9450784	1.00[EUR][1000 genomes]
rs9450791	1.00[EUR][1000 genomes]
rs9450794	1.00[AFR][1000 genomes]
rs9450796	1.00[AFR][1000 genomes]
rs9450797	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9450798	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9450799	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9450803	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88442600-88451600	Weak transcription	Primary B cells from cord blood	blood
2	chr6:88448000-88451600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr6:88448000-88451800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr6:88448200-88452000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr6:88448200-88455000	Weak transcription	HepG2	liver
6	chr6:88448400-88451400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr6:88448400-88451600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr6:88448400-88452000	Weak transcription	Primary T helper cells PMA-I stimulated	--
9	chr6:88449000-88451600	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr6:88449200-88451600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr6:88449200-88451600	Weak transcription	GM12878-XiMat	blood
12	chr6:88449400-88451400	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr6:88450800-88451600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr6:88451000-88452400	Enhancers	K562	blood
15	chr6:88451000-88453000	Enhancers	Primary B cells from peripheral blood	blood
16	chr6:88451000-88453000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr6:88451000-88453400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr6:88451200-88452800	Enhancers	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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