Variant report

Variant	rs9455320
Chromosome Location	chr6:71790705-71790706
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10484897	0.87[EUR][1000 genomes]
rs16869781	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72924533	0.96[EUR][1000 genomes]
rs72924534	0.96[EUR][1000 genomes]
rs72924544	0.96[EUR][1000 genomes]
rs72924555	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72924592	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9455324	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71788400-71791800	Weak transcription	Psoas Muscle	Psoas
2	chr6:71788800-71790800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:71788800-71791800	Enhancers	NHLF	lung
4	chr6:71788800-71792200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:71789000-71791600	Enhancers	NHDF-Ad	bronchial
6	chr6:71789000-71792800	Enhancers	HSMM	muscle
7	chr6:71789000-71793600	Enhancers	Fetal Lung	lung
8	chr6:71789200-71791400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:71789200-71791400	Enhancers	NH-A	brain
10	chr6:71789200-71791600	Enhancers	Muscle Satellite Cultured Cells	--
11	chr6:71789400-71791200	Enhancers	HSMMtube	muscle
12	chr6:71789400-71791800	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr6:71790000-71791400	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr6:71790200-71790800	Weak transcription	Liver	Liver
15	chr6:71790200-71791200	Weak transcription	Fetal Muscle Leg	muscle
16	chr6:71790200-71791400	Weak transcription	Aorta	Aorta
17	chr6:71790200-71791600	Weak transcription	Brain Anterior Caudate	brain
18	chr6:71790200-71791600	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr6:71790200-71791800	Weak transcription	Right Atrium	heart
20	chr6:71790200-71792400	Weak transcription	Left Ventricle	heart
21	chr6:71790400-71791400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr6:71790400-71792400	Enhancers	Fetal Kidney	kidney
23	chr6:71790600-71790800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr6:71790600-71790800	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr6:71790600-71790800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr6:71790600-71791400	Enhancers	Ovary	ovary
27	chr6:71790600-71791600	Enhancers	Brain Cingulate Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links