Variant report

Variant	rs9463190
Chromosome Location	chr6:46217409-46217410
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:46210701..46212307-chr6:46215301..46217905,2	K562	blood:

rs_ID	r²[population]
rs1442214	1.00[EUR][1000 genomes]
rs56788826	1.00[EUR][1000 genomes]
rs59311337	1.00[EUR][1000 genomes]
rs73448525	1.00[EUR][1000 genomes]
rs73448534	1.00[EUR][1000 genomes]
rs73454548	1.00[EUR][1000 genomes]
rs7766177	1.00[EUR][1000 genomes]
rs9463188	1.00[EUR][1000 genomes]
rs9463191	1.00[EUR][1000 genomes]
rs9463194	1.00[EUR][1000 genomes]
rs9463197	1.00[EUR][1000 genomes]
rs9463200	1.00[EUR][1000 genomes]
rs9472722	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9472725	1.00[EUR][1000 genomes]
rs9472729	1.00[EUR][1000 genomes]
rs9472732	1.00[EUR][1000 genomes]
rs9472733	1.00[EUR][1000 genomes]
rs9472735	1.00[EUR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:46209000-46219400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:46209600-46221600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr6:46212400-46219400	Weak transcription	Right Atrium	heart
4	chr6:46212600-46230000	Weak transcription	Pancreas	Pancrea
5	chr6:46212800-46218600	Weak transcription	Brain Substantia Nigra	brain
6	chr6:46212800-46218800	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr6:46213200-46222000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr6:46214200-46219200	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr6:46214200-46222000	Weak transcription	Brain Anterior Caudate	brain
10	chr6:46214400-46221000	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr6:46214600-46219400	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr6:46214600-46219400	Weak transcription	HSMMtube	muscle
13	chr6:46214600-46220600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:46214600-46222200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr6:46214600-46230600	Weak transcription	Ovary	ovary
16	chr6:46215000-46219000	Weak transcription	Aorta	Aorta
17	chr6:46215000-46219400	Weak transcription	Brain Angular Gyrus	brain
18	chr6:46215000-46219400	Weak transcription	Psoas Muscle	Psoas
19	chr6:46215200-46219400	Weak transcription	Left Ventricle	heart
20	chr6:46215200-46219400	Weak transcription	Right Ventricle	heart
21	chr6:46215400-46219400	Weak transcription	Brain Cingulate Gyrus	brain
22	chr6:46215600-46218000	Weak transcription	Stomach Smooth Muscle	stomach
23	chr6:46215600-46219000	Weak transcription	Brain Hippocampus Middle	brain
24	chr6:46217000-46220400	Weak transcription	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links