Variant report

Variant rs9474677
Chromosome Location chr6:53764055-53764056
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53737800-53768400 Weak transcription Esophagus oesophagus
2 chr6:53739000-53767800 Weak transcription Ovary ovary
3 chr6:53739000-53771800 Weak transcription Pancreas Pancrea
4 chr6:53742200-53766200 Weak transcription Fetal Stomach stomach
5 chr6:53744600-53764200 Weak transcription Fetal Intestine Small intestine
6 chr6:53746800-53768400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr6:53747600-53767800 Weak transcription Small Intestine intestine
8 chr6:53749200-53765800 Weak transcription Primary T cells from cord blood blood
9 chr6:53752400-53771000 Weak transcription Gastric stomach
10 chr6:53752400-53771800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr6:53752800-53782000 Weak transcription H1 Cell Line embryonic stem cell
12 chr6:53754800-53775600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:53754800-53779800 Weak transcription NHLF lung
14 chr6:53755000-53779800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:53756000-53781800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr6:53757800-53767400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:53757800-53768000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr6:53758000-53775600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:53759200-53767600 Weak transcription Fetal Muscle Trunk muscle
20 chr6:53759200-53767600 Weak transcription Lung lung
21 chr6:53759200-53767800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:53759200-53769400 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr6:53759200-53770800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr6:53759200-53787600 Weak transcription Spleen Spleen
25 chr6:53759200-53794400 Weak transcription Right Ventricle heart
26 chr6:53759400-53767600 Weak transcription Thymus Thymus
27 chr6:53759400-53768200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr6:53759400-53770000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:53759400-53771800 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:53759400-53786400 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr6:53759600-53767000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr6:53759600-53789800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr6:53760400-53789400 Weak transcription Stomach Mucosa stomach
34 chr6:53760400-53791200 Weak transcription Hela-S3 cervix
35 chr6:53760600-53773000 Strong transcription Dnd41 blood
36 chr6:53760600-53778800 Weak transcription Fetal Muscle Leg muscle
37 chr6:53760600-53793600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr6:53760800-53771800 Weak transcription Brain Angular Gyrus brain
39 chr6:53761000-53764200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr6:53761000-53768200 Weak transcription Aorta Aorta
41 chr6:53761000-53770800 Weak transcription Brain Substantia Nigra brain
42 chr6:53761000-53771200 Weak transcription Brain Cingulate Gyrus brain
43 chr6:53761000-53771600 Weak transcription Brain Inferior Temporal Lobe brain
44 chr6:53761000-53771800 Weak transcription Brain Anterior Caudate brain
45 chr6:53761000-53782000 Weak transcription Fetal Kidney kidney
46 chr6:53761000-53782800 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:53761000-53785400 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr6:53761200-53765200 Enhancers HUVEC blood vessel
49 chr6:53761400-53771800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr6:53761400-53776400 Weak transcription Fetal Adrenal Gland Adrenal Gland

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