Variant report

Variant	rs9476765
Chromosome Location	chr6:15169242-15169243
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs28472743	0.94[AFR][1000 genomes]
rs73724753	0.94[AFR][1000 genomes]
rs9464753	0.94[AFR][1000 genomes]
rs9464754	0.94[AFR][1000 genomes]
rs9476763	1.00[AFR][1000 genomes]
rs9476766	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15166400-15170200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:15166600-15170000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr6:15166800-15170000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links