Variant report

Variant	rs9483579
Chromosome Location	chr6:133678601-133678602
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs57814773	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6917055	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73559608	1.00[EUR][1000 genomes]
rs73559624	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73559641	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7754854	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7755198	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7774860	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493600	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493601	1.00[EUR][1000 genomes]
rs9493602	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493604	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493605	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493606	1.00[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493609	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133662200-133679200	Weak transcription	Psoas Muscle	Psoas
2	chr6:133668000-133679200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:133673600-133687600	Weak transcription	Hela-S3	cervix
4	chr6:133674000-133689800	Weak transcription	A549	lung
5	chr6:133674600-133679800	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:133675200-133678800	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr6:133678600-133679000	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr6:133678600-133679800	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr6:133678600-133680600	Enhancers	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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