The 2.0 version of rSNPBase

Variant report

Variant rs9484742
Chromosome Location chr6:143722728-143722729
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143706600-143757400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143716800-143723600 Enhancers HMEC breast
3 chr6:143717000-143723600 Enhancers NHEK skin
4 chr6:143717000-143724200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:143717600-143723000 Enhancers Fetal Muscle Leg muscle
6 chr6:143718800-143723600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:143719000-143723000 Weak transcription H9 Cell Line embryonic stem cell
8 chr6:143719200-143723600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr6:143719200-143753200 Weak transcription Aorta Aorta
10 chr6:143719400-143723400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:143719400-143726400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:143719600-143724200 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr6:143720600-143723200 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr6:143720800-143723000 Enhancers Primary T cells from cord blood blood
15 chr6:143720800-143723600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr6:143721000-143722800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr6:143721000-143723000 Enhancers Primary T cells fromperipheralblood blood
18 chr6:143721000-143723000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr6:143721000-143723000 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr6:143721200-143722800 Enhancers Primary T helper cells PMA-I stimulated --
21 chr6:143721200-143722800 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr6:143721200-143722800 Enhancers Fetal Lung lung
23 chr6:143721200-143723000 Enhancers Fetal Thymus thymus
24 chr6:143721200-143723400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr6:143721400-143722800 Enhancers Primary T helper cells fromperipheralblood blood
26 chr6:143721400-143722800 Enhancers GM12878-XiMat blood
27 chr6:143721400-143723000 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr6:143721400-143723000 Enhancers Muscle Satellite Cultured Cells --
29 chr6:143721400-143723000 Enhancers Dnd41 blood
30 chr6:143721400-143723200 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr6:143721400-143723200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:143721400-143723200 Enhancers Fetal Brain Female brain
33 chr6:143721400-143723400 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr6:143721600-143722800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr6:143721600-143722800 Enhancers Thymus Thymus
36 chr6:143721600-143722800 Enhancers Monocytes-CD14+_RO01746 blood
37 chr6:143721600-143723200 Enhancers Cortex derived primary cultured neurospheres brain
38 chr6:143721600-143723200 Enhancers HSMM muscle
39 chr6:143721600-143723600 Enhancers NH-A brain
40 chr6:143721800-143722800 Enhancers A549 lung
41 chr6:143721800-143723000 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr6:143721800-143723000 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr6:143721800-143723000 Enhancers Osteobl bone
44 chr6:143721800-143723200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr6:143722000-143723200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:143722200-143723000 Enhancers Placenta Placenta
47 chr6:143722200-143723200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr6:143722200-143723400 Enhancers Fetal Brain Male brain
49 chr6:143722200-143724200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr6:143722200-143725800 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015