Variant report

Variant	rs9487088
Chromosome Location	chr6:109725982-109725983
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs35314636	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35495138	1.00[AMR][1000 genomes]
rs9480943	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9480960	1.00[AMR][1000 genomes]
rs9487011	1.00[AMR][1000 genomes]
rs9487086	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487096	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487102	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487104	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487107	1.00[AMR][1000 genomes]
rs9487108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109705000-109745200	Weak transcription	Fetal Kidney	kidney
2	chr6:109706600-109735800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:109707000-109755400	Weak transcription	Fetal Intestine Small	intestine
4	chr6:109712800-109736200	Weak transcription	Left Ventricle	heart
5	chr6:109715400-109730400	Weak transcription	Brain Hippocampus Middle	brain
6	chr6:109721200-109760600	Weak transcription	Fetal Brain Female	brain
7	chr6:109723400-109728000	Weak transcription	Stomach Smooth Muscle	stomach
8	chr6:109724400-109727200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr6:109724400-109750400	Weak transcription	Ovary	ovary
10	chr6:109725000-109736600	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr6:109725600-109731800	Weak transcription	NHEK	skin
12	chr6:109725800-109732000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr6:109725800-109760800	Weak transcription	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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