Variant report

Variant	rs9506193
Chromosome Location	chr13:30055026-30055027
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs9508477	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427927	chr13:29729315-30062054	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv983696	chr13:30034016-30090454	Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30047200-30081000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr13:30053000-30055200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr13:30053400-30055600	Enhancers	Right Ventricle	heart
4	chr13:30053600-30057200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr13:30053800-30057600	Genic enhancers	Fetal Heart	heart
6	chr13:30054000-30055200	Enhancers	Fetal Muscle Leg	muscle
7	chr13:30054200-30055600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
8	chr13:30054400-30058200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr13:30054600-30058000	Weak transcription	Aorta	Aorta
10	chr13:30054800-30055400	Enhancers	Fetal Brain Male	brain
11	chr13:30054800-30055400	Strong transcription	Dnd41	blood
12	chr13:30054800-30055600	Enhancers	Ovary	ovary
13	chr13:30055000-30055400	Weak transcription	Left Ventricle	heart
14	chr13:30055000-30055600	Enhancers	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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