Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1016908	0.83[EUR][1000 genomes]
rs12874185	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12877870	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1330993	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16947195	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7981189	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7994701	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7997855	0.80[EUR][1000 genomes]
rs9516045	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9516046	0.81[EUR][1000 genomes]
rs9516052	0.82[EUR][1000 genomes]
rs9516053	0.82[EUR][1000 genomes]
rs9516054	0.82[EUR][1000 genomes]
rs9523559	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9523563	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9523564	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9523604	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9523613	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9523615	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9523616	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9523617	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9589471	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv456067	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv562726	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2753357	chr13:92903199-93026399	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv518324	chr13:92917856-92955354	Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92943600-92950400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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