Variant report

Variant	rs9524613
Chromosome Location	chr13:95431664-95431665
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs4773814	0.96[ASN][1000 genomes]
rs4773815	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs792291	0.83[ASN][1000 genomes]
rs792292	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832687	chr13:95412811-95582161	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2763049	chr13:95414554-95445266	Enhancers Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95422600-95431800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr13:95429800-95432400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr13:95431200-95432400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr13:95431400-95432000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr13:95431400-95432800	Weak transcription	Stomach Mucosa	stomach
6	chr13:95431400-95433200	Enhancers	Liver	Liver
7	chr13:95431600-95432000	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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