Variant report

Variant rs9535625
Chromosome Location chr13:51820902-51820903
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51805200-51825600 Weak transcription Aorta Aorta
2 chr13:51808000-51821200 Enhancers Brain Substantia Nigra brain
3 chr13:51808400-51821400 Enhancers Fetal Heart heart
4 chr13:51812600-51821000 Weak transcription Spleen Spleen
5 chr13:51813200-51822600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr13:51813600-51821200 Enhancers Brain Cingulate Gyrus brain
7 chr13:51815000-51821400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr13:51815600-51821000 Weak transcription Right Atrium heart
9 chr13:51816200-51836600 Weak transcription Adipose Nuclei Adipose
10 chr13:51816800-51836000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr13:51817000-51821000 Enhancers Brain Angular Gyrus brain
12 chr13:51817400-51821200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr13:51817400-51827200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr13:51817600-51827200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr13:51817800-51827600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr13:51818000-51821200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr13:51818800-51832800 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr13:51819000-51821000 Enhancers Brain Hippocampus Middle brain
19 chr13:51819200-51821000 Enhancers HUES6 Cell Line embryonic stem cell
20 chr13:51819200-51821200 Enhancers HUES64 Cell Line embryonic stem cell
21 chr13:51819200-51821400 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr13:51819400-51821000 Genic enhancers HUES48 Cell Line embryonic stem cell
23 chr13:51820000-51821000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
24 chr13:51820000-51821600 Enhancers Fetal Brain Female brain
25 chr13:51820000-51822200 Enhancers Fetal Kidney kidney
26 chr13:51820200-51821000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr13:51820200-51821200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr13:51820200-51821200 Flanking Active TSS Brain Germinal Matrix brain
29 chr13:51820200-51821200 Enhancers Fetal Thymus thymus
30 chr13:51820200-51821400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr13:51820200-51821800 Enhancers Fetal Lung lung
32 chr13:51820200-51822200 Enhancers Rectal Smooth Muscle rectum
33 chr13:51820200-51822400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr13:51820200-51823800 Genic enhancers H1 Cell Line embryonic stem cell
35 chr13:51820200-51825000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr13:51820400-51821000 Active TSS Brain Anterior Caudate brain
37 chr13:51820400-51821400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr13:51820400-51821800 Flanking Active TSS Stomach Smooth Muscle stomach
39 chr13:51820400-51822000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr13:51820400-51822000 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr13:51820600-51821000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr13:51820600-51821200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr13:51820600-51821200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
44 chr13:51820600-51821200 Bivalent Enhancer Fetal Stomach stomach
45 chr13:51820600-51821400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr13:51820600-51821400 Enhancers Fetal Muscle Trunk muscle
47 chr13:51820600-51821400 Enhancers Left Ventricle heart
48 chr13:51820600-51821400 Enhancers Lung lung
49 chr13:51820600-51821400 Enhancers Right Ventricle heart
50 chr13:51820600-51821600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell

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