Variant report

Variant	rs953698
Chromosome Location	chr9:103987105-103987106
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10120205	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831671	chr9:103858107-104020816	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:103981800-103992000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr9:103986400-103992400	Enhancers	Brain Hippocampus Middle	brain
3	chr9:103986800-103989400	Enhancers	Brain Anterior Caudate	brain
4	chr9:103986800-103990000	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr9:103987000-103987200	Enhancers	Fetal Brain Female	brain
6	chr9:103987000-103987800	Enhancers	Brain Angular Gyrus	brain
7	chr9:103987000-103989200	Weak transcription	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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