The 2.0 version of rSNPBase

Variant report

Variant rs9547708
Chromosome Location chr13:37546447-37546448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:37519600-37561400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr13:37520600-37560800 Weak transcription Small Intestine intestine
3 chr13:37522600-37548800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:37522800-37547000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr13:37523200-37558200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr13:37524000-37563800 Weak transcription Psoas Muscle Psoas
7 chr13:37524600-37572400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr13:37525000-37560800 Weak transcription Fetal Heart heart
9 chr13:37526600-37556200 Weak transcription Brain Angular Gyrus brain
10 chr13:37526800-37559400 Weak transcription Hela-S3 cervix
11 chr13:37529400-37546800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr13:37529400-37558200 Weak transcription Gastric stomach
13 chr13:37529600-37555600 Weak transcription Stomach Mucosa stomach
14 chr13:37531800-37570000 Strong transcription Dnd41 blood
15 chr13:37535200-37553600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr13:37535400-37549600 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr13:37539000-37558400 Weak transcription Colonic Mucosa Colon
18 chr13:37539000-37561000 Weak transcription Aorta Aorta
19 chr13:37539200-37558000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr13:37539400-37561000 Weak transcription Right Ventricle heart
21 chr13:37539400-37562400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr13:37539600-37549000 Weak transcription Ovary ovary
23 chr13:37539600-37558200 Weak transcription Brain Germinal Matrix brain
24 chr13:37539600-37562400 Weak transcription Fetal Brain Male brain
25 chr13:37539800-37557600 Weak transcription H9 Cell Line embryonic stem cell
26 chr13:37540200-37548000 Weak transcription Stomach Smooth Muscle stomach
27 chr13:37540200-37549000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr13:37540200-37549000 Weak transcription Pancreas Pancrea
29 chr13:37540200-37549200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr13:37540200-37553800 Weak transcription HSMMtube muscle
31 chr13:37540200-37558800 Weak transcription Fetal Kidney kidney
32 chr13:37540200-37561400 Weak transcription Esophagus oesophagus
33 chr13:37540200-37562200 Weak transcription K562 blood
34 chr13:37540400-37548000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr13:37540400-37558400 Weak transcription Brain Substantia Nigra brain
36 chr13:37540800-37556200 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr13:37541000-37549400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr13:37541000-37549600 Weak transcription Brain Anterior Caudate brain
39 chr13:37541000-37554200 Weak transcription NHEK skin
40 chr13:37541000-37558600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr13:37541200-37549000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr13:37541400-37549200 Strong transcription NHDF-Ad bronchial
43 chr13:37542000-37553000 Weak transcription HepG2 liver
44 chr13:37542200-37547400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr13:37542400-37556400 Weak transcription Colon Smooth Muscle Colon
46 chr13:37542600-37549800 Strong transcription Primary hematopoietic stem cells blood
47 chr13:37542800-37547000 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr13:37543200-37547400 Weak transcription NH-A brain
49 chr13:37543200-37548800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr13:37543200-37549400 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015