The 2.0 version of rSNPBase

Variant report

Variant rs955214
Chromosome Location chr2:30445926-30445927
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30439800-30446200 Enhancers Fetal Thymus thymus
2 chr2:30440400-30446400 Enhancers Thymus Thymus
3 chr2:30440800-30448400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:30441000-30446000 Weak transcription Primary monocytes fromperipheralblood blood
5 chr2:30441000-30446200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr2:30441000-30446400 Weak transcription Psoas Muscle Psoas
7 chr2:30441000-30447800 Weak transcription Right Atrium heart
8 chr2:30441200-30446800 Weak transcription Right Ventricle heart
9 chr2:30441400-30446800 Weak transcription Left Ventricle heart
10 chr2:30441400-30446800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr2:30441400-30448000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:30441800-30446600 Enhancers Fetal Heart heart
13 chr2:30441800-30448000 Weak transcription Esophagus oesophagus
14 chr2:30442200-30446800 Weak transcription Fetal Intestine Small intestine
15 chr2:30442200-30448000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr2:30442400-30447800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:30443000-30447800 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr2:30443000-30447800 Weak transcription Placenta Placenta
19 chr2:30443400-30446800 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:30443400-30448000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr2:30443600-30448000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:30444000-30447800 Enhancers Primary T helper cells fromperipheralblood blood
23 chr2:30444000-30448000 Enhancers Primary neutrophils fromperipheralblood blood
24 chr2:30444000-30448000 Weak transcription Gastric stomach
25 chr2:30444200-30446400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr2:30444200-30447800 Enhancers Primary T cells from cord blood blood
27 chr2:30444400-30447000 Weak transcription Small Intestine intestine
28 chr2:30444400-30448000 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr2:30444600-30446800 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr2:30444600-30447800 Enhancers Primary T cells fromperipheralblood blood
31 chr2:30444600-30447800 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr2:30444800-30446400 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr2:30444800-30446400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr2:30444800-30446800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr2:30444800-30447800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr2:30445000-30446400 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr2:30445000-30447800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
38 chr2:30445200-30446800 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr2:30445200-30447800 Enhancers Primary B cells from cord blood blood
40 chr2:30445200-30447800 Enhancers Primary B cells from peripheral blood blood
41 chr2:30445200-30448000 Weak transcription HMEC breast
42 chr2:30445400-30446600 Enhancers GM12878-XiMat blood
43 chr2:30445600-30447800 Enhancers Duodenum Mucosa Duodenum
44 chr2:30445600-30449400 Enhancers Spleen Spleen
45 chr2:30445600-30450200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr2:30445800-30447800 Weak transcription Lung lung

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Last update: Aug 31, 2015