The 2.0 version of rSNPBase

Variant report

Variant rs9562783
Chromosome Location chr13:48514629-48514630
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48501000-48531200 Weak transcription Spleen Spleen
2 chr13:48502000-48530800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr13:48503800-48516800 Weak transcription NHDF-Ad bronchial
4 chr13:48506000-48531400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr13:48506800-48522600 Weak transcription Fetal Brain Male brain
6 chr13:48507200-48524000 Weak transcription Lung lung
7 chr13:48507200-48548800 Weak transcription Stomach Mucosa stomach
8 chr13:48507800-48515200 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr13:48507800-48515200 Weak transcription Osteobl bone
10 chr13:48507800-48530600 Weak transcription Brain Angular Gyrus brain
11 chr13:48508000-48515200 Weak transcription Primary B cells from peripheral blood blood
12 chr13:48508000-48515200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr13:48508000-48515400 Weak transcription Fetal Kidney kidney
14 chr13:48508000-48516200 Weak transcription Brain Substantia Nigra brain
15 chr13:48508000-48522400 Weak transcription GM12878-XiMat blood
16 chr13:48508000-48531400 Weak transcription Rectal Smooth Muscle rectum
17 chr13:48508200-48515400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr13:48508200-48515800 Weak transcription Psoas Muscle Psoas
19 chr13:48508200-48520000 Weak transcription HepG2 liver
20 chr13:48508200-48529600 Weak transcription Brain Cingulate Gyrus brain
21 chr13:48508400-48515200 Weak transcription Primary monocytes fromperipheralblood blood
22 chr13:48508600-48515400 Weak transcription Brain Hippocampus Middle brain
23 chr13:48508600-48530800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr13:48508800-48515200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr13:48508800-48522000 Weak transcription NH-A brain
26 chr13:48509000-48515200 Weak transcription Muscle Satellite Cultured Cells --
27 chr13:48509000-48530800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr13:48509200-48528400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr13:48509400-48515200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr13:48510200-48515400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr13:48510600-48515400 Weak transcription Colon Smooth Muscle Colon
32 chr13:48510800-48517400 Strong transcription Primary T cells from cord blood blood
33 chr13:48510800-48517400 Strong transcription Left Ventricle heart
34 chr13:48511000-48515200 Weak transcription Right Ventricle heart
35 chr13:48511000-48515400 Weak transcription Fetal Heart heart
36 chr13:48511000-48515400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr13:48511000-48516400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr13:48511000-48517600 Strong transcription Fetal Muscle Trunk muscle
39 chr13:48511000-48530600 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr13:48511000-48536600 Weak transcription Esophagus oesophagus
41 chr13:48511400-48516600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr13:48511600-48514800 Strong transcription A549 lung
43 chr13:48511600-48514800 Strong transcription HSMM muscle
44 chr13:48511800-48515200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr13:48511800-48516600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr13:48511800-48518800 Strong transcription Dnd41 blood
47 chr13:48511800-48531200 Weak transcription HUVEC blood vessel
48 chr13:48512000-48515200 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr13:48512000-48515200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr13:48512000-48516800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015