Variant report

Variant	rs9584068
Chromosome Location	chr13:93495925-93495926
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17299669	1.00[CEU][hapmap]
rs9584077	1.00[AMR][1000 genomes]
rs9589629	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869070	chr13:93347616-94286933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv456072	chr13:93419362-93506864	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv562746	chr13:93419362-93506864	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv900907	chr13:93472377-93597799	Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93494000-93496400	Enhancers	HMEC	breast
2	chr13:93494000-93496400	Enhancers	Osteobl	bone
3	chr13:93494000-93496600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr13:93494200-93496400	Enhancers	NHLF	lung
5	chr13:93494800-93496000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr13:93494800-93496800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr13:93495000-93496000	Weak transcription	Rectal Smooth Muscle	rectum
8	chr13:93495000-93496600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr13:93495000-93496600	Enhancers	HSMM	muscle
10	chr13:93495000-93496800	Enhancers	Muscle Satellite Cultured Cells	--
11	chr13:93495400-93496400	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
12	chr13:93495400-93496400	Enhancers	HSMMtube	muscle
13	chr13:93495600-93496200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr13:93495600-93496400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr13:93495800-93496000	Enhancers	NH-A	brain
16	chr13:93495800-93496200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr13:93495800-93496400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr13:93495800-93496400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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