The 2.0 version of rSNPBase

Variant report

Variant rs9590042
Chromosome Location chr13:95253542-95253543
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95248800-95253600 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr13:95248800-95253600 Weak transcription HUVEC blood vessel
3 chr13:95249000-95253600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr13:95249000-95253600 Weak transcription Primary hematopoietic stem cells blood
5 chr13:95249000-95253600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr13:95249000-95253600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr13:95249000-95253600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr13:95249000-95253600 Weak transcription Muscle Satellite Cultured Cells --
9 chr13:95249000-95253600 Weak transcription Adipose Nuclei Adipose
10 chr13:95249000-95253600 Weak transcription Fetal Muscle Trunk muscle
11 chr13:95249000-95253600 Weak transcription Right Atrium heart
12 chr13:95249000-95253600 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr13:95249000-95253800 Weak transcription Spleen Spleen
14 chr13:95249200-95253600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr13:95249200-95253600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr13:95249200-95253600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr13:95249200-95253600 Weak transcription Colonic Mucosa Colon
18 chr13:95249200-95253600 Weak transcription NHEK skin
19 chr13:95250600-95253600 Weak transcription NHLF lung
20 chr13:95251000-95253600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr13:95252000-95253600 Enhancers Fetal Intestine Large intestine
22 chr13:95252200-95253600 Enhancers Liver Liver
23 chr13:95252400-95253600 Enhancers Duodenum Mucosa Duodenum
24 chr13:95252800-95253600 Enhancers Primary B cells from peripheral blood blood
25 chr13:95253000-95253600 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr13:95253000-95253600 Enhancers Fetal Muscle Leg muscle
27 chr13:95253000-95253600 Enhancers Dnd41 blood
28 chr13:95253000-95253600 Weak transcription HMEC breast
29 chr13:95253000-95255600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
30 chr13:95253200-95253600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr13:95253200-95253600 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr13:95253200-95253600 Enhancers Primary neutrophils fromperipheralblood blood
33 chr13:95253200-95253600 Weak transcription Primary B cells from cord blood blood
34 chr13:95253200-95253600 Enhancers Primary T cells from cord blood blood
35 chr13:95253200-95253600 Enhancers Primary T cells fromperipheralblood blood
36 chr13:95253200-95253600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr13:95253200-95253600 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr13:95253200-95253600 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr13:95253200-95253600 Enhancers Primary T helper cells PMA-I stimulated --
40 chr13:95253200-95253600 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr13:95253200-95253600 Enhancers Cortex derived primary cultured neurospheres brain
42 chr13:95253200-95253600 Enhancers Brain Anterior Caudate brain
43 chr13:95253200-95253600 Enhancers Brain Cingulate Gyrus brain
44 chr13:95253200-95253600 Active TSS Fetal Brain Male brain
45 chr13:95253200-95253600 Enhancers Fetal Brain Female brain
46 chr13:95253200-95253600 Enhancers Fetal Stomach stomach
47 chr13:95253200-95253600 Enhancers Fetal Thymus thymus
48 chr13:95253200-95253600 Enhancers Rectal Smooth Muscle rectum
49 chr13:95253200-95253600 Enhancers NH-A brain
50 chr13:95253200-95253800 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015