Variant report

Variant	rs9590148
Chromosome Location	chr13:95619914-95619915
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95619254..95622585-chr13:95624903..95627476,4	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs9561756	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv274954	chr13:95617339-95621812	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3405940	chr13:95618976-95621724	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95619200-95620200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
2	chr13:95619400-95620000	Bivalent/Poised TSS	Brain Anterior Caudate	brain
3	chr13:95619400-95621000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr13:95619400-95621200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr13:95619400-95621200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr13:95619400-95621200	Active TSS	A549	lung
7	chr13:95619600-95620000	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr13:95619600-95620000	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr13:95619600-95620000	Bivalent Enhancer	Adipose Nuclei	Adipose
10	chr13:95619600-95620000	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
11	chr13:95619600-95620000	Enhancers	Pancreas	Pancrea
12	chr13:95619600-95620200	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr13:95619600-95620200	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr13:95619600-95620400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
15	chr13:95619600-95620400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
16	chr13:95619600-95620400	Flanking Bivalent TSS/Enh	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr13:95619600-95620600	Bivalent Enhancer	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr13:95619600-95620600	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
19	chr13:95619600-95620600	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
20	chr13:95619600-95620600	Active TSS	Rectal Smooth Muscle	rectum
21	chr13:95619600-95621000	Active TSS	H1 Cell Line	embryonic stem cell
22	chr13:95619600-95621000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr13:95619600-95621000	Bivalent Enhancer	Liver	Liver
24	chr13:95619600-95621000	Bivalent/Poised TSS	Psoas Muscle	Psoas
25	chr13:95619600-95621000	Bivalent/Poised TSS	Right Ventricle	heart
26	chr13:95619600-95621200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr13:95619600-95621200	Active TSS	H9 Cell Line	embryonic stem cell
28	chr13:95619600-95621200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr13:95619600-95621200	Active TSS	HUES48 Cell Line	embryonic stem cell
30	chr13:95619600-95621200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
31	chr13:95619600-95621200	Active TSS	iPS-20b Cell Line	embryonic stem cell
32	chr13:95619600-95621200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr13:95619600-95621200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr13:95619600-95621200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr13:95619600-95621200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr13:95619600-95621200	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr13:95619600-95621200	Active TSS	Brain Substantia Nigra	brain
38	chr13:95619600-95621200	Bivalent Enhancer	Fetal Brain Male	brain
39	chr13:95619600-95621200	Bivalent/Poised TSS	HSMMtube	muscle
40	chr13:95619600-95621200	Bivalent/Poised TSS	NHEK	skin
41	chr13:95619600-95621400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
42	chr13:95619600-95621400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
43	chr13:95619600-95621400	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
44	chr13:95619600-95621400	Bivalent/Poised TSS	Brain Inferior Temporal Lobe	brain
45	chr13:95619800-95620000	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr13:95619800-95620000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
47	chr13:95619800-95620000	Bivalent Enhancer	Primary T cells from cord blood	blood
48	chr13:95619800-95620000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr13:95619800-95620000	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr13:95619800-95620000	Bivalent Enhancer	Fetal Heart	heart

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