The 2.0 version of rSNPBase

Variant report

Variant rs9609620
Chromosome Location chr22:33118615-33118616
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33112200-33121400 Enhancers Fetal Thymus thymus
2 chr22:33113000-33121600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr22:33113400-33120400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr22:33114200-33119400 Weak transcription Esophagus oesophagus
5 chr22:33114400-33119000 Weak transcription Small Intestine intestine
6 chr22:33114400-33119400 Weak transcription Left Ventricle heart
7 chr22:33114400-33121400 Weak transcription Colon Smooth Muscle Colon
8 chr22:33114600-33121800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr22:33115600-33119600 Enhancers Thymus Thymus
10 chr22:33115800-33119400 Enhancers Dnd41 blood
11 chr22:33115800-33122200 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr22:33116000-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr22:33116000-33119600 Enhancers Primary T cells from cord blood blood
14 chr22:33116200-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr22:33116400-33119600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr22:33116400-33120400 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr22:33116400-33120600 Enhancers Primary T helper cells PMA-I stimulated --
18 chr22:33116600-33120400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr22:33116600-33120400 Enhancers Osteobl bone
20 chr22:33116600-33120800 Enhancers Fetal Stomach stomach
21 chr22:33116800-33120400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr22:33116800-33121600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
23 chr22:33116800-33121800 Enhancers Primary monocytes fromperipheralblood blood
24 chr22:33117000-33119200 Weak transcription Fetal Kidney kidney
25 chr22:33117000-33119400 Weak transcription Colonic Mucosa Colon
26 chr22:33117200-33119000 Weak transcription NH-A brain
27 chr22:33117200-33120600 Enhancers HMEC breast
28 chr22:33117400-33118800 Weak transcription Adipose Nuclei Adipose
29 chr22:33117400-33118800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr22:33117400-33118800 Weak transcription NHEK skin
31 chr22:33117400-33119000 Weak transcription Duodenum Mucosa Duodenum
32 chr22:33117400-33119000 Weak transcription Fetal Lung lung
33 chr22:33117400-33119000 Weak transcription NHDF-Ad bronchial
34 chr22:33117400-33119200 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr22:33117400-33119400 Weak transcription Rectal Smooth Muscle rectum
36 chr22:33117400-33119600 Weak transcription Fetal Intestine Large intestine
37 chr22:33117400-33121000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr22:33117400-33124200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr22:33117600-33118800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr22:33117600-33119000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr22:33117600-33119000 Weak transcription NHLF lung
42 chr22:33118000-33119200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr22:33118000-33120400 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr22:33118200-33118800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr22:33118200-33120400 Enhancers Spleen Spleen
46 chr22:33118400-33120000 Enhancers Fetal Muscle Trunk muscle
47 chr22:33118400-33120400 Enhancers Primary T helper cells fromperipheralblood blood
48 chr22:33118400-33120400 Enhancers Fetal Muscle Leg muscle
49 chr22:33118400-33120600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr22:33118400-33121200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015