Variant report

Variant	rs9624999
Chromosome Location	chr22:21211732-21211733
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ELK1	chr22:21211478-21214267	K562	blood:	n/a	n/a
2	MAX	chr22:21211331-21213729	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213109-21213118 chr22:21213108-21213119 chr22:21213109-21213118 chr22:21211395-21211402 chr22:21211393-21211403 chr22:21212684-21212694 chr22:21211394-21211403 chr22:21211393-21211404 chr22:21212297-21212307 chr22:21213259-21213269
3	ATF3	chr22:21211515-21214274	K562	blood:	n/a	chr22:21213207-21213216 chr22:21213153-21213162
4	ZMIZ1	chr22:21211254-21214108	K562	blood:	n/a	n/a
5	JUND	chr22:21211325-21213851	K562	blood:	n/a	chr22:21213152-21213161 chr22:21213318-21213327
6	POLR2A	chr22:21211438-21214529	K562	blood:	n/a	n/a
7	UBTF	chr22:21211556-21214290	K562	blood:	n/a	n/a
8	ATF1	chr22:21211166-21212418	K562	blood:	n/a	n/a
9	NR2F2	chr22:21210883-21214632	K562	blood:	n/a	chr22:21213111-21213126
10	UBTF	chr22:21211502-21212438	K562	blood:	n/a	n/a
11	GATA3	chr22:21211419-21211848	MCF-7	breast:	n/a	chr22:21211790-21211797 chr22:21211790-21211797 chr22:21211790-21211797
12	TEAD4	chr22:21211548-21214368	K562	blood:	n/a	n/a
13	POLR2A	chr22:21211704-21211815	K562	blood:	n/a	n/a
14	MAZ	chr22:21211520-21213901	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213109-21213118 chr22:21213108-21213119 chr22:21213109-21213118 chr22:21212684-21212694 chr22:21212297-21212307 chr22:21213259-21213269
15	EP300	chr22:21211251-21214257	K562	blood:	n/a	chr22:21213341-21213350 chr22:21213159-21213175 chr22:21213310-21213326 chr22:21212749-21212765
16	CBX3	chr22:21211302-21213878	K562	blood:	n/a	n/a
17	STAT1	chr22:21211539-21213713	K562	blood:	n/a	n/a
18	ZBTB7A	chr22:21211541-21214014	K562	blood:	n/a	chr22:21212730-21212739
19	SMARCB1	chr22:21211129-21214243	K562	blood:	n/a	n/a
20	GATA3	chr22:21211623-21212306	SH-SY5Y	brain:	n/a	chr22:21211790-21211797 chr22:21211790-21211797 chr22:21211790-21211797
21	EGR1	chr22:21211484-21213715	K562	blood:	n/a	chr22:21213318-21213328 chr22:21212731-21212741 chr22:21212730-21212743 chr22:21212600-21212613
22	ZNF143	chr22:21211306-21214083	K562	blood:	n/a	n/a
23	ARID3A	chr22:21211166-21212153	K562	blood:	n/a	n/a
24	TRIM28	chr22:21211010-21214385	K562	blood:	n/a	n/a
25	USF1	chr22:21211010-21213779	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213262-21213278 chr22:21213158-21213174
26	MTA3	chr22:21211695-21213242	GM12878	blood:	n/a	n/a
27	MXI1	chr22:21211023-21214394	SK-N-SH	brain:	n/a	chr22:21211393-21211402 chr22:21214100-21214109 chr22:21213110-21213119
28	MYC	chr22:21211224-21212195	K562	blood:	n/a	chr22:21211395-21211402 chr22:21211393-21211403 chr22:21211394-21211403 chr22:21211393-21211404
29	TBL1XR1	chr22:21211191-21214335	K562	blood:	n/a	n/a
30	HEY1	chr22:21211455-21214534	K562	blood:	n/a	chr22:21212177-21212186 chr22:21213254-21213269
31	HCFC1	chr22:21211598-21214147	K562	blood:	n/a	n/a
32	MYC	chr22:21211366-21214156	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213109-21213118 chr22:21213108-21213119 chr22:21213109-21213118 chr22:21211395-21211402 chr22:21211393-21211403 chr22:21212684-21212694 chr22:21211394-21211403 chr22:21211393-21211404 chr22:21212297-21212307 chr22:21213259-21213269
33	GATA2	chr22:21211484-21211967	SH-SY5Y	brain:	n/a	chr22:21211790-21211797 chr22:21211790-21211797 chr22:21211790-21211797
34	PML	chr22:21211221-21214507	K562	blood:	n/a	n/a
35	RCOR1	chr22:21211188-21214321	K562	blood:	n/a	n/a
36	E2F6	chr22:21211618-21211986	K562	blood:	n/a	n/a
37	MXI1	chr22:21210788-21213783	IMR90	lung:	n/a	chr22:21211393-21211402 chr22:21213110-21213119
38	RCOR1	chr22:21211188-21214199	K562	blood:	n/a	n/a
39	EGR1	chr22:21211536-21213583	K562	blood:	n/a	chr22:21213318-21213328 chr22:21212731-21212741 chr22:21212730-21212743 chr22:21212600-21212613
40	IRF1	chr22:21211350-21213827	K562	blood:	n/a	chr22:21212785-21212799 chr22:21212139-21212151 chr22:21212681-21212695 chr22:21213258-21213272
41	E2F6	chr22:21211549-21212033	K562	blood:	n/a	n/a
42	MAFK	chr22:21211126-21214234	K562	blood:	n/a	chr22:21211296-21211312 chr22:21211297-21211308 chr22:21211295-21211309 chr22:21211296-21211307 chr22:21211296-21211307
43	REST	chr22:21211477-21211934	K562	blood:	n/a	n/a
44	TAL1	chr22:21211261-21213612	K562	blood:	n/a	n/a
45	CBX3	chr22:21210853-21214712	K562	blood:	n/a	n/a
46	TEAD4	chr22:21210859-21214465	K562	blood:	n/a	n/a
47	MYC	chr22:21211598-21213500	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213109-21213118 chr22:21213108-21213119 chr22:21213109-21213118 chr22:21212684-21212694 chr22:21212297-21212307 chr22:21213259-21213269
48	MYC	chr22:21211226-21213801	K562	blood:	n/a	chr22:21213107-21213120 chr22:21213109-21213118 chr22:21213108-21213119 chr22:21213109-21213118 chr22:21211395-21211402 chr22:21211393-21211403 chr22:21212684-21212694 chr22:21211394-21211403 chr22:21211393-21211404 chr22:21212297-21212307 chr22:21213259-21213269
49	CCNT2	chr22:21211550-21213710	K562	blood:	n/a	chr22:21212599-21212608 chr22:21212810-21212819
50	JUND	chr22:21211632-21214441	SK-N-SH	brain:	n/a	chr22:21213152-21213161 chr22:21213318-21213327

No.	Distal block	Cell Line	Cell type
1	chr22:21209752..21215098-chr22:21353821..21358065,10	K562	blood:
2	chr22:21150200..21153431-chr22:21211715..21215197,5	K562	blood:
3	chr22:21211581..21214189-chr22:21334580..21336986,2	K562	blood:
4	chr22:21155686..21159712-chr22:21211175..21215732,5	K562	blood:
5	chr22:20877754..20879859-chr22:21211345..21213772,2	K562	blood:
6	chr22:21211240..21214685-chr22:21334860..21339012,8	K562	blood:
7	chr22:21210926..21227332-chr22:21268935..21277289,51	K562	blood:
8	chr22:21208804..21215170-chr22:21270042..21275936,11	MCF-7	breast:
9	chr22:21211398..21216606-chr22:21269856..21277240,16	K562	blood:
10	chr22:20861899..20863612-chr22:21210848..21212903,2	K562	blood:
11	chr22:21203040..21205818-chr22:21209987..21212703,3	MCF-7	breast:
12	chr22:20861899..20863684-chr22:21210848..21213659,3	K562	blood:
13	chr22:21147432..21149908-chr22:21211352..21213367,2	K562	blood:
14	chr22:21210943..21215199-chr22:21365730..21372829,9	K562	blood:
15	chr22:21210334..21214913-chr22:21348473..21351457,4	K562	blood:

Variant related genes	Relation type
SNAP29	TF binding region
ENSG00000161149	Chromatin interaction
ENSG00000230513	Chromatin interaction
ENSG00000184436	Chromatin interaction
ENSG00000272829	Chromatin interaction
ENSG00000099917	Chromatin interaction
ENSG00000099949	Chromatin interaction
ENSG00000099942	Chromatin interaction
ENSG00000241973	Chromatin interaction
ENSG00000236003	Chromatin interaction
ENSG00000099957	Chromatin interaction

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12165574	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12168260	0.99[AFR][1000 genomes]
rs12170128	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13433547	0.94[AFR][1000 genomes]
rs73390412	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7364242	0.94[AFR][1000 genomes]
rs9620496	0.80[AFR][1000 genomes]
rs9620556	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9620575	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9624742	0.80[AFR][1000 genomes]
rs9624978	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9625020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9625044	0.99[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:79 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056614	chr22:20470598-21462724	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
2	nsv491637	chr22:20659547-21440514	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
3	nsv916634	chr22:20659547-21464119	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
4	nsv533942	chr22:20659547-21505417	Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
5	nsv529472	chr22:20659547-21561514	Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
6	nsv914390	chr22:20697466-21460008	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
7	nsv588291	chr22:20698139-21461274	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
8	nsv917647	chr22:20708889-21440515	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
9	nsv531742	chr22:20708890-21407690	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
10	nsv533852	chr22:20708890-21561514	Weak transcription Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
11	nsv1061867	chr22:20716924-21462446	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
12	nsv1058870	chr22:20716924-21567219	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
13	nsv918225	chr22:20716924-21611338	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
14	nsv531744	chr22:20718170-21427936	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
15	nsv915954	chr22:20732437-21505417	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
16	nsv948669	chr22:20732809-21461607	Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
17	nsv531746	chr22:20733427-21505417	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
18	nsv588294	chr22:20733495-21365384	Bivalent Enhancer Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
19	nsv588295	chr22:20733495-21462353	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
20	nsv588296	chr22:20733495-21465780	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
21	nsv1056065	chr22:20734244-21460658	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
22	nsv544586	chr22:20734244-21460658	Strong transcription Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
23	nsv1067074	chr22:20739124-21440654	Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
24	nsv544587	chr22:20739124-21440654	Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
25	nsv1066482	chr22:20739125-21440655	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
26	nsv544588	chr22:20739125-21440655	Strong transcription Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
27	nsv1063333	chr22:20739324-21353297	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
28	nsv544590	chr22:20739324-21353297	Genic enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
29	nsv1059978	chr22:20739324-21440515	Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
30	nsv544591	chr22:20739324-21440515	Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
31	nsv949306	chr22:20742450-21461607	Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
32	nsv523162	chr22:20743536-21462353	Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
33	nsv1056565	chr22:20745762-21460658	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
34	nsv529335	chr22:20748976-21499971	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
35	nsv533337	chr22:20754407-21440515	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
36	nsv918090	chr22:20754421-21505417	Flanking Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
37	nsv491620	chr22:20754422-21440514	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
38	nsv1067639	chr22:20754422-21505417	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
39	nsv529720	chr22:20754422-21505417	Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
40	nsv995094	chr22:20895155-21374512	Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
41	nsv588297	chr22:20913757-21465780	Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
42	nsv917525	chr22:20918549-21440514	Enhancers Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
43	esv2763693	chr22:20935469-21465835	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
44	nsv588299	chr22:20954760-21462353	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
45	nsv1064472	chr22:20958983-21440515	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
46	nsv544594	chr22:20958983-21440515	Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
47	nsv530673	chr22:20958984-21379958	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
48	nsv1056343	chr22:21007607-21460658	Flanking Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
49	nsv530455	chr22:21025654-21505417	Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
50	nsv530675	chr22:21045038-21455556	Strong transcription Active TSS Bivalent/Poised TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:21207800-21211800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr22:21208800-21212000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
3	chr22:21209600-21211800	Enhancers	Fetal Thymus	thymus
4	chr22:21209600-21212000	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr22:21210200-21211800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr22:21210200-21211800	Enhancers	Fetal Intestine Large	intestine
7	chr22:21210400-21211800	Enhancers	Primary hematopoietic stem cells	blood
8	chr22:21210400-21212000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr22:21210400-21212200	Enhancers	Stomach Mucosa	stomach
10	chr22:21210600-21211800	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr22:21210800-21211800	Enhancers	Fetal Heart	heart
12	chr22:21210800-21212000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr22:21210800-21212200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr22:21211000-21211800	Enhancers	H1 Cell Line	embryonic stem cell
15	chr22:21211000-21211800	Enhancers	Primary B cells from cord blood	blood
16	chr22:21211000-21211800	Enhancers	Fetal Lung	lung
17	chr22:21211000-21211800	Enhancers	Right Atrium	heart
18	chr22:21211000-21211800	Enhancers	Right Ventricle	heart
19	chr22:21211000-21212000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr22:21211000-21212000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr22:21211000-21212000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr22:21211000-21212000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
23	chr22:21211000-21212000	Enhancers	Ovary	ovary
24	chr22:21211000-21212000	Enhancers	Psoas Muscle	Psoas
25	chr22:21211000-21212000	Enhancers	Spleen	Spleen
26	chr22:21211000-21212200	Enhancers	Primary B cells from peripheral blood	blood
27	chr22:21211000-21212200	Flanking Active TSS	Brain Hippocampus Middle	brain
28	chr22:21211000-21212200	Enhancers	Left Ventricle	heart
29	chr22:21211000-21212200	Enhancers	Placenta Amnion	Placenta Amnion
30	chr22:21211000-21212200	Enhancers	Small Intestine	intestine
31	chr22:21211000-21212200	Flanking Active TSS	NHDF-Ad	bronchial
32	chr22:21211000-21212400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr22:21211000-21212400	Flanking Active TSS	Brain Anterior Caudate	brain
34	chr22:21211000-21212400	Flanking Active TSS	Osteobl	bone
35	chr22:21211000-21212600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr22:21211000-21212800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr22:21211200-21211800	Enhancers	Fetal Kidney	kidney
38	chr22:21211200-21211800	Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr22:21211200-21211800	Enhancers	Rectal Mucosa Donor 31	rectum
40	chr22:21211200-21211800	Enhancers	A549	lung
41	chr22:21211200-21212200	Flanking Active TSS	Brain Angular Gyrus	brain
42	chr22:21211200-21212200	Flanking Active TSS	GM12878-XiMat	blood
43	chr22:21211200-21212200	Flanking Active TSS	NHLF	lung
44	chr22:21211200-21212400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr22:21211200-21212400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
46	chr22:21211200-21212400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
47	chr22:21211200-21212400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
48	chr22:21211200-21212400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr22:21211200-21212400	Flanking Active TSS	Brain Cingulate Gyrus	brain
50	chr22:21211200-21212400	Flanking Active TSS	Colon Smooth Muscle	Colon

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