Variant report

Variant	rs9630733
Chromosome Location	chr17:45290441-45290442
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11570577	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062983	chr17:45030095-45789543	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45284400-45293400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr17:45286200-45290800	Active TSS	Right Atrium	heart
3	chr17:45286600-45296200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr17:45287000-45294200	Weak transcription	Primary B cells from peripheral blood	blood
5	chr17:45288000-45290600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr17:45288400-45302000	Weak transcription	HSMM	muscle
7	chr17:45288600-45296200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr17:45289800-45291200	Transcr. at gene 5' and 3'	K562	blood
9	chr17:45290200-45291000	Active TSS	Fetal Heart	heart
10	chr17:45290400-45290600	Enhancers	Psoas Muscle	Psoas
11	chr17:45290400-45290600	Transcr. at gene 5' and 3'	HSMMtube	muscle
12	chr17:45290400-45291200	Genic enhancers	Fetal Muscle Leg	muscle
13	chr17:45290400-45291400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr17:45290400-45291400	Weak transcription	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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