Variant report

Variant	rs9633775
Chromosome Location	chr10:6107897-6107898
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr10:6107870-6108189	K562	blood:	n/a	chr10:6108013-6108024 chr10:6108011-6108024 chr10:6108011-6108022
2	EP300	chr10:6107842-6108154	K562	blood:	n/a	n/a
3	ZNF384	chr10:6107656-6108112	K562	blood:	n/a	n/a

Variant related genes	Relation type
IL2RA	TF binding region

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10905713	0.81[ASN][1000 genomes]
rs10905718	0.81[ASN][1000 genomes]
rs10905719	0.81[ASN][1000 genomes]
rs12412095	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34061	chr10:5726821-6225187	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1042286	chr10:5795129-6578445	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:6104200-6112600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:6104600-6111800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr10:6104600-6113600	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr10:6104800-6110200	Weak transcription	GM12878-XiMat	blood
5	chr10:6105000-6108000	Weak transcription	Primary B cells from peripheral blood	blood
6	chr10:6105000-6108200	Weak transcription	Primary B cells from cord blood	blood
7	chr10:6105000-6109200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr10:6105200-6108000	Weak transcription	Primary T cells from cord blood	blood
9	chr10:6105200-6108000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr10:6105600-6108000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr10:6106200-6108400	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr10:6106400-6110000	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr10:6106800-6114800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:6107000-6110800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
15	chr10:6107200-6108000	Enhancers	Primary T cells fromperipheralblood	blood
16	chr10:6107200-6108400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr10:6107200-6108600	Enhancers	Left Ventricle	heart
18	chr10:6107200-6108800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
19	chr10:6107200-6108800	Enhancers	Fetal Lung	lung
20	chr10:6107200-6109800	Enhancers	Primary T helper cells PMA-I stimulated	--
21	chr10:6107200-6110000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr10:6107200-6110600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr10:6107200-6112000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
24	chr10:6107200-6114800	Enhancers	Primary hematopoietic stem cells short term culture	blood
25	chr10:6107200-6115000	Enhancers	Primary monocytes fromperipheralblood	blood
26	chr10:6107400-6108000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr10:6107400-6108600	Enhancers	Small Intestine	intestine
28	chr10:6107400-6108800	Enhancers	Right Atrium	heart
29	chr10:6107400-6108800	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr10:6107400-6109000	Enhancers	Placenta	Placenta
31	chr10:6107400-6112000	Enhancers	Adipose Nuclei	Adipose
32	chr10:6107400-6114800	Enhancers	Primary hematopoietic stem cells	blood
33	chr10:6107600-6108000	Weak transcription	Lung	lung
34	chr10:6107600-6108000	Weak transcription	Spleen	Spleen
35	chr10:6107600-6108200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
36	chr10:6107600-6108400	Enhancers	Brain Substantia Nigra	brain
37	chr10:6107600-6108600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr10:6107600-6108600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
39	chr10:6107600-6108800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
40	chr10:6107600-6111800	Enhancers	Primary neutrophils fromperipheralblood	blood

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