Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10956467	0.81[EUR][1000 genomes]
rs13282471	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4440594	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4440595	0.81[EUR][1000 genomes]
rs4538836	0.81[EUR][1000 genomes]
rs4538837	0.81[EUR][1000 genomes]
rs4559209	0.81[EUR][1000 genomes]
rs4604397	0.81[EUR][1000 genomes]
rs4642606	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6415503	0.87[EUR][1000 genomes]
rs7462361	0.81[EUR][1000 genomes]
rs7817816	0.81[EUR][1000 genomes]
rs7818156	0.81[EUR][1000 genomes]
rs7821450	0.82[EUR][1000 genomes]
rs7823113	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7826482	0.81[EUR][1000 genomes]
rs7826798	0.81[EUR][1000 genomes]
rs7833532	0.81[EUR][1000 genomes]
rs7833637	0.81[EUR][1000 genomes]
rs7843204	0.81[EUR][1000 genomes]
rs8180939	0.81[EUR][1000 genomes]
rs9642887	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9643243	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891445	chr8:130152109-130224721	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130176400-130179600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:130177800-130183000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr8:130178600-130179400	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr8:130178600-130179600	Enhancers	Thymus	Thymus
5	chr8:130178800-130179400	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr8:130178800-130181400	Enhancers	Fetal Thymus	thymus

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