The 2.0 version of rSNPBase

Variant report

Variant rs964432
Chromosome Location chr6:12049618-12049619
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12018600-12052000 Weak transcription Thymus Thymus
2 chr6:12034800-12061000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:12035000-12049800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr6:12035200-12052200 Weak transcription Stomach Mucosa stomach
5 chr6:12040200-12060800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr6:12040400-12050200 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr6:12040400-12058800 Weak transcription Fetal Muscle Leg muscle
8 chr6:12040400-12059600 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr6:12041000-12060800 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr6:12041400-12052200 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr6:12042200-12050000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:12045200-12052000 Weak transcription Primary hematopoietic stem cells blood
13 chr6:12045400-12050000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr6:12045400-12051400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr6:12045400-12052600 Weak transcription Duodenum Mucosa Duodenum
16 chr6:12045600-12050800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr6:12045600-12051400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr6:12045600-12051400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:12045600-12056000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr6:12045600-12058200 Weak transcription Small Intestine intestine
21 chr6:12045600-12058600 Weak transcription A549 lung
22 chr6:12045600-12058800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr6:12045600-12059800 Weak transcription Left Ventricle heart
24 chr6:12045600-12059800 Weak transcription Psoas Muscle Psoas
25 chr6:12045600-12061000 Weak transcription Fetal Thymus thymus
26 chr6:12045600-12061000 Weak transcription Pancreas Pancrea
27 chr6:12045600-12061200 Weak transcription Gastric stomach
28 chr6:12045600-12065800 Weak transcription Aorta Aorta
29 chr6:12045600-12066200 Weak transcription HSMM muscle
30 chr6:12045600-12066400 Weak transcription Hela-S3 cervix
31 chr6:12045800-12051000 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr6:12045800-12051200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr6:12045800-12052200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr6:12045800-12052400 Weak transcription Stomach Smooth Muscle stomach
35 chr6:12045800-12066000 Weak transcription HUVEC blood vessel
36 chr6:12046000-12053000 Weak transcription NHDF-Ad bronchial
37 chr6:12046000-12060800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr6:12046600-12054400 Enhancers Primary B cells from peripheral blood blood
39 chr6:12047400-12053200 Enhancers Primary neutrophils fromperipheralblood blood
40 chr6:12047400-12054000 Enhancers Primary monocytes fromperipheralblood blood
41 chr6:12047800-12053800 Enhancers Primary T helper cells PMA-I stimulated --
42 chr6:12047800-12054200 Enhancers Primary B cells from cord blood blood
43 chr6:12047800-12058800 Weak transcription Esophagus oesophagus
44 chr6:12047800-12059800 Weak transcription H1 Cell Line embryonic stem cell
45 chr6:12048000-12050400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr6:12048000-12050600 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr6:12048000-12060800 Weak transcription Fetal Intestine Small intestine
48 chr6:12048000-12061200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr6:12048200-12056000 Weak transcription H9 Cell Line embryonic stem cell
50 chr6:12048200-12058400 Weak transcription Liver Liver

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Last update: Aug 31, 2015