Variant report

Variant	rs9656135
Chromosome Location	chr7:106768356-106768357
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:106767322..106768894-chr7:106783746..106785460,2	K562	blood:
2	chr7:106768254..106771092-chr7:106771784..106773738,2	K562	blood:
3	chr7:106763924..106766602-chr7:106768132..106771104,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10249401	0.86[CEU][hapmap];0.82[CHB][hapmap];0.80[JPT][hapmap];0.86[AMR][1000 genomes]
rs2299419	0.87[CEU][hapmap];0.86[AMR][1000 genomes]
rs2707373	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2707374	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28362525	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs59103028	0.81[EUR][1000 genomes]
rs6466156	0.81[ASW][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes]
rs73413378	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106756600-106771200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr7:106759800-106771600	Weak transcription	Brain Anterior Caudate	brain
3	chr7:106759800-106774000	Weak transcription	Left Ventricle	heart
4	chr7:106760200-106771200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr7:106760200-106782000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr7:106760400-106808400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:106760600-106771400	Weak transcription	Fetal Kidney	kidney
8	chr7:106763000-106807800	Weak transcription	Stomach Smooth Muscle	stomach
9	chr7:106763400-106779000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr7:106764200-106779200	Weak transcription	Fetal Stomach	stomach
11	chr7:106765000-106779000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:106766200-106769800	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr7:106766200-106771600	Weak transcription	Brain Angular Gyrus	brain
14	chr7:106767200-106768800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
15	chr7:106767200-106769200	Weak transcription	Adipose Nuclei	Adipose
16	chr7:106767200-106771200	Weak transcription	Brain Cingulate Gyrus	brain
17	chr7:106767400-106768600	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr7:106767400-106770600	Weak transcription	Primary hematopoietic stem cells	blood
19	chr7:106767400-106797600	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr7:106767600-106768400	Enhancers	H1 Cell Line	embryonic stem cell
21	chr7:106767800-106769000	Strong transcription	K562	blood
22	chr7:106767800-106771000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr7:106767800-106782400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr7:106768200-106768800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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