Variant report

Variant	rs9666179
Chromosome Location	chr4:30871591-30871592
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878810	chr4:30823157-30987395	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30849200-30872200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:30855200-30879600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:30865200-30872200	Weak transcription	Left Ventricle	heart
4	chr4:30868800-30879200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr4:30868800-30886800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr4:30869400-30872400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr4:30870000-30872200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr4:30870000-30872200	Weak transcription	NHEK	skin
9	chr4:30870000-30872400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr4:30870200-30879400	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr4:30870800-30872000	Weak transcription	Fetal Stomach	stomach
12	chr4:30870800-30872200	Weak transcription	Fetal Heart	heart
13	chr4:30870800-30872200	Weak transcription	Stomach Smooth Muscle	stomach
14	chr4:30870800-30903200	Weak transcription	Fetal Lung	lung
15	chr4:30871000-30872400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr4:30871200-30873000	Weak transcription	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links