Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA1	chr14:24297131-24297714	HepG2	liver:	n/a	n/a
2	FOXA2	chr14:24296927-24298031	HepG2	liver:	n/a	n/a
3	FOXA1	chr14:24297185-24297645	HepG2	liver:	n/a	n/a
4	CTCF	chr14:24297280-24297430	HepG2	liver:	n/a	n/a
5	FOXA2	chr14:24297231-24297630	HepG2	liver:	n/a	n/a
6	FOXA1	chr14:24297163-24297639	HepG2	liver:	n/a	n/a
7	NR2F2	chr14:24296804-24297721	MCF-7	breast:	n/a	n/a
8	CTCF	chr14:24297240-24297390	HepG2	liver:	n/a	n/a
9	TCF7L2	chr14:24297148-24297904	HepG2	liver:	n/a	chr14:24297442-24297456
10	FOXA2	chr14:24297260-24297596	A549	lung:	n/a	n/a
11	FOXA1	chr14:24297169-24297621	HepG2	liver:	n/a	n/a
12	FOXA2	chr14:24297115-24297657	A549	lung:	n/a	n/a
13	TCF7L2	chr14:24297288-24297542	Hela-S3	cervix:	n/a	chr14:24297442-24297456

Variant related genes	Relation type
ENSG00000258887	TF binding region

rSNPs within LD-proxies of this variant (count:20)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043299	chr14:23766696-24351724	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
2	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
3	nsv564045	chr14:24224245-24348343	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv901494	chr14:24243637-24386159	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24295400-24297400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr14:24295800-24302000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr14:24296400-24297600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr14:24296400-24299800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr14:24296400-24302000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr14:24296400-24302000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr14:24296600-24298600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr14:24296600-24298600	Enhancers	A549	lung
9	chr14:24296600-24301200	Enhancers	HSMMtube	muscle
10	chr14:24296600-24301800	Enhancers	HSMM	muscle
11	chr14:24296800-24297600	Enhancers	Placenta	Placenta
12	chr14:24297000-24298200	Enhancers	Colonic Mucosa	Colon
13	chr14:24297000-24298400	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr14:24297000-24298400	Enhancers	HepG2	liver
15	chr14:24297000-24298800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr14:24297000-24299000	Enhancers	Primary hematopoietic stem cells	blood
17	chr14:24297200-24297400	Enhancers	Duodenum Smooth Muscle	Duodenum
18	chr14:24297200-24297600	Enhancers	Ovary	ovary
19	chr14:24297200-24297800	Enhancers	Gastric	stomach
20	chr14:24297200-24298600	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr14:24297200-24301000	Enhancers	Hela-S3	cervix

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