Variant report

Variant	rs9677147
Chromosome Location	chr2:72318964-72318965
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10200295	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11884312	0.82[ASN][1000 genomes]
rs11894560	0.82[ASN][1000 genomes]
rs11899565	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13420618	0.82[ASN][1000 genomes]
rs72904482	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1004274	chr2:72314859-72324310	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72313600-72319200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:72317800-72319000	Weak transcription	Hela-S3	cervix
3	chr2:72317800-72320200	Enhancers	Duodenum Mucosa	Duodenum
4	chr2:72318200-72319800	Enhancers	Fetal Intestine Small	intestine
5	chr2:72318200-72331800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr2:72318800-72320200	Enhancers	NHEK	skin
7	chr2:72318800-72320800	Enhancers	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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