The 2.0 version of rSNPBase

Variant report

Variant rs9685193
Chromosome Location chr4:48742375-48742376
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48730200-48744400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr4:48731600-48744000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr4:48731600-48751000 Weak transcription Lung lung
4 chr4:48731600-48779800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:48738000-48746800 Enhancers Primary T helper cells PMA-I stimulated --
6 chr4:48738200-48745400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr4:48738200-48746600 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr4:48738200-48747000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr4:48738400-48742600 Weak transcription HUVEC blood vessel
10 chr4:48739400-48745600 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr4:48739400-48747200 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr4:48739800-48744000 Weak transcription Brain Substantia Nigra brain
13 chr4:48740000-48745200 Enhancers Primary T regulatory cells fromperipheralblood blood
14 chr4:48740400-48746400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr4:48740600-48743800 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr4:48740600-48745200 Enhancers Primary T cells fromperipheralblood blood
17 chr4:48740800-48743000 Enhancers Liver Liver
18 chr4:48740800-48746000 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr4:48741000-48742600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr4:48741000-48751200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr4:48741200-48744800 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr4:48741400-48743400 Enhancers GM12878-XiMat blood
23 chr4:48741400-48745600 Enhancers Primary T cells from cord blood blood
24 chr4:48741400-48747000 Enhancers Primary T helper cells fromperipheralblood blood
25 chr4:48741600-48742600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:48741600-48744400 Enhancers Small Intestine intestine
27 chr4:48741800-48742600 Enhancers Pancreas Pancrea
28 chr4:48741800-48743200 Enhancers Primary B cells from peripheral blood blood
29 chr4:48741800-48743200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr4:48741800-48745000 Enhancers Primary hematopoietic stem cells blood
31 chr4:48742000-48742600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr4:48742000-48743200 Weak transcription Psoas Muscle Psoas
33 chr4:48742000-48743400 Weak transcription Left Ventricle heart
34 chr4:48742000-48744000 Weak transcription Thymus Thymus
35 chr4:48742000-48744400 Weak transcription Stomach Mucosa stomach
36 chr4:48742000-48744600 Enhancers K562 blood
37 chr4:48742000-48758800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr4:48742000-48768400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr4:48742200-48742800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr4:48742200-48743000 Weak transcription NHEK skin
41 chr4:48742200-48744400 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015