Variant report

Variant	rs9695254
Chromosome Location	chr9:92483404-92483405
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92217843..92220235-chr9:92480730..92484370,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000130222	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs73649344	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9695866	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9696538	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9696711	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9775307	1.00[CHB][hapmap];1.00[TSI][hapmap];0.87[ASN][1000 genomes]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92465800-92507200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:92476000-92483800	Enhancers	Fetal Lung	lung
3	chr9:92479600-92484200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:92480000-92483600	Enhancers	Duodenum Smooth Muscle	Duodenum
5	chr9:92481800-92483600	Weak transcription	Fetal Intestine Large	intestine
6	chr9:92481800-92484200	Weak transcription	Fetal Intestine Small	intestine
7	chr9:92482200-92484000	Enhancers	Adipose Nuclei	Adipose
8	chr9:92482400-92483800	Enhancers	Placenta Amnion	Placenta Amnion
9	chr9:92482400-92484000	Bivalent Enhancer	Fetal Muscle Leg	muscle
10	chr9:92482400-92484400	Enhancers	Brain Germinal Matrix	brain
11	chr9:92482600-92483800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr9:92482600-92484000	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr9:92482600-92484200	Enhancers	Primary B cells from peripheral blood	blood
14	chr9:92482800-92484000	Enhancers	Primary hematopoietic stem cells	blood
15	chr9:92482800-92484000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr9:92482800-92484000	Enhancers	Spleen	Spleen
17	chr9:92482800-92484200	Enhancers	Primary B cells from cord blood	blood
18	chr9:92482800-92484200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr9:92482800-92484200	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr9:92483000-92483600	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr9:92483000-92483800	Enhancers	Fetal Thymus	thymus
22	chr9:92483000-92483800	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr9:92483000-92483800	Enhancers	GM12878-XiMat	blood
24	chr9:92483000-92484000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr9:92483000-92484000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
26	chr9:92483000-92484200	Enhancers	Primary monocytes fromperipheralblood	blood
27	chr9:92483200-92483800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
28	chr9:92483200-92484200	Enhancers	Placenta	Placenta
29	chr9:92483200-92487800	Weak transcription	Fetal Heart	heart
30	chr9:92483400-92483800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr9:92483400-92483800	Enhancers	Primary T cells from cord blood	blood
32	chr9:92483400-92484200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr9:92483400-92487600	Weak transcription	Fetal Stomach	stomach

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