Variant report
Variant | rs9709508 |
---|---|
Chromosome Location | chr18:40240702-40240703 |
allele | C/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10163703 | 0.83[AMR][1000 genomes] |
rs10163713 | 0.81[AMR][1000 genomes] |
rs10164178 | 0.81[AMR][1000 genomes] |
rs11082285 | 0.88[AMR][1000 genomes] |
rs11082287 | 0.88[AMR][1000 genomes] |
rs11082288 | 0.88[AMR][1000 genomes] |
rs11082289 | 0.88[AMR][1000 genomes] |
rs11874622 | 0.81[AMR][1000 genomes] |
rs11877370 | 0.81[AMR][1000 genomes] |
rs11877822 | 0.86[AMR][1000 genomes] |
rs12185391 | 0.81[AMR][1000 genomes] |
rs12327031 | 0.80[AMR][1000 genomes] |
rs12454240 | 0.82[AMR][1000 genomes] |
rs12454508 | 0.81[AMR][1000 genomes] |
rs12454517 | 0.80[AMR][1000 genomes] |
rs12456487 | 0.87[AMR][1000 genomes] |
rs12456690 | 0.81[AFR][1000 genomes];0.87[AMR][1000 genomes] |
rs12457363 | 0.85[AMR][1000 genomes] |
rs12458032 | 0.81[AMR][1000 genomes] |
rs12604180 | 0.81[AMR][1000 genomes] |
rs12605774 | 0.83[AMR][1000 genomes] |
rs12605791 | 0.80[AMR][1000 genomes] |
rs1430905 | 0.81[AMR][1000 genomes] |
rs1430907 | 0.88[AMR][1000 genomes] |
rs1430909 | 0.88[AMR][1000 genomes] |
rs1594433 | 0.88[AMR][1000 genomes] |
rs16976497 | 0.88[AMR][1000 genomes] |
rs16976532 | 0.86[AMR][1000 genomes] |
rs16976733 | 0.80[AMR][1000 genomes] |
rs1943173 | 0.87[AMR][1000 genomes] |
rs2068500 | 0.81[AMR][1000 genomes] |
rs2099220 | 0.83[AMR][1000 genomes] |
rs2163383 | 0.88[AMR][1000 genomes] |
rs3850129 | 0.81[AMR][1000 genomes] |
rs3861286 | 0.86[AMR][1000 genomes] |
rs3910099 | 0.88[AMR][1000 genomes] |
rs3910102 | 0.81[AMR][1000 genomes] |
rs60850907 | 0.80[AMR][1000 genomes] |
rs718571 | 0.81[AMR][1000 genomes] |
rs7228411 | 0.82[AMR][1000 genomes] |
rs7234842 | 0.81[AMR][1000 genomes] |
rs72895369 | 0.83[AMR][1000 genomes] |
rs72895388 | 0.81[AMR][1000 genomes] |
rs72895391 | 0.88[AMR][1000 genomes] |
rs72895392 | 0.88[AMR][1000 genomes] |
rs72897419 | 0.86[AMR][1000 genomes] |
rs72897444 | 0.81[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs72897453 | 0.88[AMR][1000 genomes] |
rs72897467 | 0.85[AMR][1000 genomes] |
rs8092214 | 0.86[AMR][1000 genomes] |
rs8099114 | 0.81[AMR][1000 genomes] |
rs988109 | 0.81[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3447158 | chr18:40045478-40320720 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
2 | nsv833632 | chr18:40187679-40388058 | Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv1056794 | chr18:40197837-40688514 | Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr18:40230200-40241600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |