Variant report

Variant rs9725511
Chromosome Location chr1:145610001-145610002
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145589400-145610200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:145608600-145610200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:145608600-145610200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:145608600-145610200 Weak transcription Esophagus oesophagus
5 chr1:145608800-145610200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:145608800-145610200 Weak transcription Gastric stomach
7 chr1:145608800-145610200 Weak transcription Lung lung
8 chr1:145608800-145610200 Weak transcription Stomach Mucosa stomach
9 chr1:145608800-145610400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:145608800-145610400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:145608800-145610400 Weak transcription Spleen Spleen
12 chr1:145609000-145610200 Enhancers Brain Substantia Nigra brain
13 chr1:145609000-145610200 Weak transcription Small Intestine intestine
14 chr1:145609000-145610600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
15 chr1:145609000-145610800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:145609200-145610200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:145609200-145610200 Enhancers Primary B cells from peripheral blood blood
18 chr1:145609200-145610200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr1:145609400-145610200 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr1:145609400-145610400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
21 chr1:145609400-145611600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:145609400-145611600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:145609400-145611600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:145609400-145611600 Active TSS HUES64 Cell Line embryonic stem cell
25 chr1:145609400-145611600 Active TSS iPS-20b Cell Line embryonic stem cell
26 chr1:145609400-145611600 Active TSS Muscle Satellite Cultured Cells --
27 chr1:145609400-145611600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:145609400-145611600 Active TSS Stomach Smooth Muscle stomach
29 chr1:145609400-145611600 Active TSS A549 lung
30 chr1:145609400-145611600 Active TSS NH-A brain
31 chr1:145609400-145612600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:145609400-145612600 Active TSS NHLF lung
33 chr1:145609600-145610200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:145609600-145610200 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr1:145609600-145610200 Enhancers Pancreas Pancrea
36 chr1:145609600-145611400 Active TSS Rectal Smooth Muscle rectum
37 chr1:145609600-145611600 Active TSS HUES6 Cell Line embryonic stem cell
38 chr1:145609600-145611600 Active TSS Right Atrium heart
39 chr1:145609600-145612800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:145609800-145610200 Active TSS Primary T helper 17 cells PMA-I stimulated --
41 chr1:145609800-145610200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:145609800-145610200 Weak transcription Fetal Heart heart
43 chr1:145609800-145610200 Active TSS HepG2 liver
44 chr1:145609800-145610400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:145609800-145610400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:145609800-145610600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:145609800-145611400 Active TSS Brain Inferior Temporal Lobe brain
48 chr1:145609800-145611400 Active TSS Duodenum Smooth Muscle Duodenum
49 chr1:145609800-145611600 Active TSS HUES48 Cell Line embryonic stem cell
50 chr1:145609800-145611600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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