Variant report

Variant rs9725547
Chromosome Location chr1:153583365-153583366
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153578800-153584800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:153579400-153583600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:153579800-153583600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:153580200-153584800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr1:153580600-153583600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:153580800-153583600 Flanking Active TSS Osteobl bone
7 chr1:153581000-153583400 Enhancers Sigmoid Colon Sigmoid Colon
8 chr1:153581000-153584000 Enhancers Colon Smooth Muscle Colon
9 chr1:153581000-153584200 Enhancers Fetal Lung lung
10 chr1:153581200-153584200 Enhancers Gastric stomach
11 chr1:153581200-153584200 Enhancers Pancreas Pancrea
12 chr1:153581400-153583600 Enhancers Ovary ovary
13 chr1:153581400-153584200 Enhancers Left Ventricle heart
14 chr1:153581400-153584800 Enhancers Fetal Heart heart
15 chr1:153581600-153584000 Enhancers Spleen Spleen
16 chr1:153581800-153583600 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr1:153581800-153583600 Enhancers Placenta Placenta
18 chr1:153581800-153583600 Flanking Active TSS A549 lung
19 chr1:153581800-153584200 Enhancers Primary monocytes fromperipheralblood blood
20 chr1:153581800-153584200 Enhancers Fetal Muscle Trunk muscle
21 chr1:153581800-153584200 Enhancers Fetal Muscle Leg muscle
22 chr1:153581800-153584200 Enhancers Right Atrium heart
23 chr1:153581800-153584200 Enhancers Monocytes-CD14+_RO01746 blood
24 chr1:153581800-153584400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:153582000-153583400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:153582000-153583400 Enhancers Adipose Nuclei Adipose
27 chr1:153582000-153583600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:153582000-153583600 Enhancers Brain Hippocampus Middle brain
29 chr1:153582000-153583600 Genic enhancers Fetal Intestine Small intestine
30 chr1:153582000-153583800 Weak transcription Fetal Kidney kidney
31 chr1:153582000-153584000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:153582000-153584000 Enhancers Brain Anterior Caudate brain
33 chr1:153582000-153584000 Enhancers Fetal Intestine Large intestine
34 chr1:153582000-153584200 Weak transcription Aorta Aorta
35 chr1:153582000-153584200 Enhancers Lung lung
36 chr1:153582000-153584400 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr1:153582200-153583400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr1:153582200-153583400 Enhancers Psoas Muscle Psoas
39 chr1:153582200-153583800 Enhancers Skeletal Muscle Female skeletal muscle
40 chr1:153582200-153584000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:153582200-153584200 Enhancers Liver Liver
42 chr1:153582200-153584600 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:153582200-153584600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:153582200-153585000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:153582200-153585200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr1:153582400-153584000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:153582400-153584000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:153582400-153584000 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:153582400-153584000 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr1:153582400-153584000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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