Variant report

Variant	rs9743575
Chromosome Location	chr14:85835926-85835927
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10134158	0.81[EUR][1000 genomes]
rs10134168	0.81[EUR][1000 genomes]
rs10134230	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10134654	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10137988	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10140949	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10141045	0.82[EUR][1000 genomes]
rs10141200	0.85[EUR][1000 genomes]
rs10141255	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10141471	0.87[AMR][1000 genomes]
rs11157041	0.81[AMR][1000 genomes]
rs12050319	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12434847	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12437031	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12437346	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12878139	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12878789	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12879229	0.81[AMR][1000 genomes]
rs12882686	0.81[EUR][1000 genomes]
rs12882868	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12890771	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs17108728	0.87[AMR][1000 genomes]
rs1957064	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2093268	0.80[EUR][1000 genomes]
rs2415522	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28367031	0.90[ASN][1000 genomes]
rs35160151	0.83[EUR][1000 genomes]
rs35287240	0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs35712728	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35807641	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35924435	0.84[EUR][1000 genomes]
rs36128129	0.83[EUR][1000 genomes]
rs36161173	0.81[AMR][1000 genomes]
rs4902238	0.83[EUR][1000 genomes]
rs4902239	0.85[EUR][1000 genomes]
rs4902259	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4902308	0.81[AMR][1000 genomes]
rs60779326	0.85[EUR][1000 genomes]
rs7150092	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7151246	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7152746	0.81[AMR][1000 genomes]
rs9322992	0.81[AMR][1000 genomes]
rs975521	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047924	chr14:85826280-85868228	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85832400-85840200	Weak transcription	Ovary	ovary

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