Variant report

Variant	rs9754809
Chromosome Location	chr3:23045059-23045060
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs6784763	1.00[AMR][1000 genomes]
rs6797802	1.00[EUR][1000 genomes]
rs7624130	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23041800-23045200	Enhancers	Fetal Lung	lung
2	chr3:23041800-23045200	Enhancers	Fetal Stomach	stomach
3	chr3:23042000-23045200	Enhancers	Psoas Muscle	Psoas
4	chr3:23042600-23046600	Weak transcription	Fetal Kidney	kidney
5	chr3:23043000-23046400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr3:23043800-23045200	Enhancers	Brain Hippocampus Middle	brain
7	chr3:23043800-23045200	Enhancers	Fetal Heart	heart
8	chr3:23044000-23045400	Enhancers	Fetal Muscle Leg	muscle
9	chr3:23044400-23045200	Enhancers	Adipose Nuclei	Adipose
10	chr3:23044600-23045200	Enhancers	Brain Cingulate Gyrus	brain
11	chr3:23044600-23045200	Enhancers	Esophagus	oesophagus
12	chr3:23044600-23045200	Enhancers	Pancreas	Pancrea
13	chr3:23044600-23045200	Enhancers	Placenta Amnion	Placenta Amnion
14	chr3:23044600-23045200	Enhancers	Osteobl	bone
15	chr3:23044800-23045200	Enhancers	Rectal Mucosa Donor 31	rectum
16	chr3:23044800-23045200	Enhancers	Stomach Mucosa	stomach
17	chr3:23044800-23045400	Enhancers	HMEC	breast
18	chr3:23044800-23045400	Enhancers	HUVEC	blood vessel
19	chr3:23044800-23046600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr3:23045000-23045200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr3:23045000-23045400	Enhancers	Skeletal Muscle Male	skeletal muscle
22	chr3:23045000-23045400	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr3:23045000-23046200	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr3:23045000-23046200	Weak transcription	NH-A	brain
25	chr3:23045000-23046400	Weak transcription	NHLF	lung
26	chr3:23045000-23046800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links