Variant report
Variant | rs9785145 |
---|---|
Chromosome Location | chr5:68165308-68165309 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:6)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:6 , 50 per page) page:
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No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | SPI1 | chr5:68165032-68165648 | GM12878 | blood: | n/a | n/a |
2 | SPI1 | chr5:68165221-68165370 | K562 | blood: | n/a | n/a |
3 | SPI1 | chr5:68165131-68165494 | GM12891 | blood: | n/a | n/a |
4 | SPI1 | chr5:68165212-68165385 | K562 | blood: | n/a | n/a |
5 | SPI1 | chr5:68165159-68165431 | GM12878 | blood: | n/a | n/a |
6 | SPI1 | chr5:68165126-68165399 | GM12891 | blood: | n/a | n/a |
No data |
No data |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000212249 | TF binding region |
rs_ID | r2[population] |
---|---|
rs10100753 | 0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs10955717 | 0.88[AMR][1000 genomes] |
rs12550770 | 0.81[EUR][1000 genomes] |
rs13276159 | 0.91[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs2046370 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs4961056 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4961058 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4961059 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4961060 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4961065 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6999952 | 0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs958099 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs981711 | 0.81[EUR][1000 genomes];0.88[ASN][1000 genomes] |
No data |