Variant report

Variant	rs9787512
Chromosome Location	chr10:92762865-92762866
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11186416	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12259812	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12259967	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17103770	0.91[ASN][1000 genomes]
rs28662270	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs41461347	0.95[EUR][1000 genomes]
rs4933637	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4933640	0.91[ASN][1000 genomes]
rs59534805	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831945	chr10:92590576-92793582	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92744200-92766200	Weak transcription	Right Ventricle	heart
2	chr10:92754400-92765400	Weak transcription	Thymus	Thymus
3	chr10:92756400-92766400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr10:92760000-92765600	ZNF genes & repeats	GM12878-XiMat	blood
5	chr10:92760600-92766200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr10:92761400-92766200	Enhancers	Dnd41	blood
7	chr10:92761600-92763000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr10:92761800-92782800	Weak transcription	Aorta	Aorta
9	chr10:92762200-92763000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:92762200-92763000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr10:92762200-92763000	Enhancers	Right Atrium	heart
12	chr10:92762400-92763000	Enhancers	HSMMtube	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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