The 2.0 version of rSNPBase

Variant report

Variant rs9790846
Chromosome Location chr4:99559942-99559943
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99546600-99560000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr4:99548000-99560600 Weak transcription Right Atrium heart
3 chr4:99548000-99569200 Weak transcription Gastric stomach
4 chr4:99548000-99577000 Weak transcription Esophagus oesophagus
5 chr4:99548400-99563600 Weak transcription HSMM muscle
6 chr4:99549600-99563200 Weak transcription HMEC breast
7 chr4:99549800-99563600 Weak transcription NHEK skin
8 chr4:99550000-99563600 Weak transcription HUVEC blood vessel
9 chr4:99551800-99563200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:99552600-99569600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:99552800-99560000 Weak transcription Thymus Thymus
12 chr4:99552800-99560200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr4:99552800-99569200 Weak transcription Fetal Stomach stomach
14 chr4:99553200-99564200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr4:99553600-99560000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr4:99554000-99564000 Weak transcription Osteobl bone
17 chr4:99554200-99562600 Weak transcription NH-A brain
18 chr4:99554200-99564200 Weak transcription Pancreas Pancrea
19 chr4:99554200-99569200 Weak transcription Spleen Spleen
20 chr4:99554400-99564200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr4:99555000-99561600 Weak transcription Fetal Brain Male brain
22 chr4:99555800-99563200 Enhancers Brain Cingulate Gyrus brain
23 chr4:99556600-99560000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr4:99556600-99560600 Enhancers Brain Anterior Caudate brain
25 chr4:99557600-99560800 Weak transcription Fetal Brain Female brain
26 chr4:99558000-99560600 Enhancers Brain Hippocampus Middle brain
27 chr4:99558000-99560800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:99558000-99561000 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr4:99558000-99561800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr4:99558000-99562000 Enhancers Brain Substantia Nigra brain
31 chr4:99558000-99563600 Enhancers Brain Angular Gyrus brain
32 chr4:99558200-99560200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr4:99558200-99560600 Enhancers Ovary ovary
34 chr4:99558200-99563000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr4:99558200-99564200 Weak transcription Fetal Heart heart
36 chr4:99558400-99563200 Weak transcription Right Ventricle heart
37 chr4:99559000-99560400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr4:99559200-99560000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:99559200-99560200 Enhancers Muscle Satellite Cultured Cells --
40 chr4:99559200-99560400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr4:99559200-99560600 Enhancers Primary T cells fromperipheralblood blood
42 chr4:99559200-99560600 Enhancers NHDF-Ad bronchial
43 chr4:99559200-99560800 Enhancers Breast Myoepithelial Primary Cells Breast
44 chr4:99559200-99560800 Enhancers Placenta Placenta
45 chr4:99559200-99560800 Enhancers Stomach Mucosa stomach
46 chr4:99559200-99561200 Enhancers Cortex derived primary cultured neurospheres brain
47 chr4:99559400-99560200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr4:99559400-99560600 Enhancers Primary T helper cells PMA-I stimulated --
49 chr4:99559400-99560800 Enhancers Brain Germinal Matrix brain
50 chr4:99559400-99561000 Enhancers NHLF lung

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Last update: Aug 31, 2015