Variant report

Variant	rs9800888
Chromosome Location	chr14:85835431-85835432
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1022756	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1072272	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10943409	0.88[ASN][1000 genomes]
rs10943414	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10943417	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1548241	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2092528	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2320210	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4365896	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4708314	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57144450	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58791359	0.87[ASN][1000 genomes]
rs59787482	0.87[ASN][1000 genomes]
rs6912149	0.88[ASN][1000 genomes]
rs6912561	0.87[ASN][1000 genomes]
rs6912606	0.87[ASN][1000 genomes]
rs6912721	0.87[ASN][1000 genomes]
rs6913599	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6916958	0.87[ASN][1000 genomes]
rs6929259	0.88[ASN][1000 genomes]
rs7776431	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9343560	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9343562	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9352433	0.88[ASN][1000 genomes]
rs9359247	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9361191	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9361195	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs978310	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047924	chr14:85826280-85868228	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85832400-85840200	Weak transcription	Ovary	ovary

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