The 2.0 version of rSNPBase

Variant report

Variant rs9804599
Chromosome Location chr11:46931864-46931865
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46911200-46933800 Weak transcription Fetal Kidney kidney
2 chr11:46917800-46934000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr11:46917800-46934000 Weak transcription NHLF lung
4 chr11:46918800-46934000 Weak transcription Colonic Mucosa Colon
5 chr11:46921600-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:46921600-46933800 Weak transcription NHEK skin
7 chr11:46921600-46934000 Weak transcription Rectal Smooth Muscle rectum
8 chr11:46921600-46934200 Weak transcription Esophagus oesophagus
9 chr11:46921600-46936000 Weak transcription Pancreas Pancrea
10 chr11:46921600-46936000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:46921800-46934000 Weak transcription Fetal Intestine Large intestine
12 chr11:46921800-46938400 Weak transcription Gastric stomach
13 chr11:46922200-46934000 Weak transcription Duodenum Mucosa Duodenum
14 chr11:46922200-46934000 Weak transcription Fetal Intestine Small intestine
15 chr11:46923000-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr11:46926000-46932000 Weak transcription Psoas Muscle Psoas
17 chr11:46926000-46934000 Weak transcription Fetal Brain Male brain
18 chr11:46926200-46932800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr11:46926400-46934000 Weak transcription Right Atrium heart
20 chr11:46926400-46934000 Weak transcription Right Ventricle heart
21 chr11:46927600-46932200 Enhancers Cortex derived primary cultured neurospheres brain
22 chr11:46927800-46933600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:46927800-46933600 Weak transcription Spleen Spleen
24 chr11:46928400-46934000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr11:46928600-46933200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr11:46928600-46933800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr11:46928600-46933800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr11:46928600-46933800 Weak transcription HSMMtube muscle
29 chr11:46928600-46934000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:46928600-46934000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:46928600-46934000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr11:46928600-46934200 Weak transcription Stomach Mucosa stomach
33 chr11:46928600-46937200 Weak transcription HepG2 liver
34 chr11:46928800-46933000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr11:46928800-46933600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr11:46928800-46933600 Weak transcription Fetal Muscle Trunk muscle
37 chr11:46928800-46933800 Weak transcription Brain Germinal Matrix brain
38 chr11:46928800-46933800 Weak transcription Fetal Brain Female brain
39 chr11:46928800-46933800 Weak transcription Fetal Stomach stomach
40 chr11:46928800-46933800 Weak transcription NH-A brain
41 chr11:46928800-46934000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr11:46928800-46934000 Weak transcription Fetal Muscle Leg muscle
43 chr11:46928800-46934000 Weak transcription Left Ventricle heart
44 chr11:46929000-46933600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:46929000-46934000 Weak transcription Stomach Smooth Muscle stomach
46 chr11:46929000-46934200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr11:46929200-46933800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr11:46929200-46933800 Weak transcription Fetal Lung lung
49 chr11:46929400-46933400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr11:46929400-46933600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015