Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56439625..56442094-chr3:56460240..56463198,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11130518	0.86[ASN][1000 genomes]
rs11130519	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130520	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11718232	0.89[EUR][1000 genomes]
rs1491158	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1491159	0.86[ASN][1000 genomes]
rs1546060	0.86[ASN][1000 genomes]
rs1546061	0.83[ASN][1000 genomes]
rs1844785	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs34421578	0.89[EUR][1000 genomes]
rs4974213	0.81[EUR][1000 genomes]
rs6445788	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6763636	0.88[ASN][1000 genomes]
rs6768071	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6790637	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6805882	0.88[ASN][1000 genomes]
rs6809729	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs931461	0.87[ASN][1000 genomes]
rs9814545	0.81[EUR][1000 genomes]
rs9817231	0.88[ASN][1000 genomes]
rs9822993	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9844598	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9851360	0.82[ASN][1000 genomes]
rs9854966	0.88[ASN][1000 genomes]
rs9855014	0.81[EUR][1000 genomes]
rs9860812	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9875056	0.81[EUR][1000 genomes]
rs9876092	0.81[EUR][1000 genomes]
rs9880091	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876816	chr3:56422771-56457705	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56424000-56447400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:56433600-56447800	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr3:56434000-56447800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr3:56434800-56442800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr3:56436600-56457400	Weak transcription	Pancreas	Pancrea

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