The 2.0 version of rSNPBase

Variant report

Variant rs9819471
Chromosome Location chr3:100124679-100124680
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100121000-100127000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:100121000-100127000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:100121000-100127000 Weak transcription Gastric stomach
4 chr3:100121800-100131000 Weak transcription Psoas Muscle Psoas
5 chr3:100122000-100127000 Weak transcription Aorta Aorta
6 chr3:100122000-100143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr3:100122400-100127000 Weak transcription Thymus Thymus
8 chr3:100122400-100132400 Weak transcription Primary T cells from cord blood blood
9 chr3:100122600-100126200 Weak transcription Fetal Muscle Trunk muscle
10 chr3:100122600-100127000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:100122600-100127000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:100122600-100129800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr3:100122600-100132400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr3:100122600-100133600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:100122600-100149200 Weak transcription Left Ventricle heart
16 chr3:100122800-100126000 Weak transcription Brain Hippocampus Middle brain
17 chr3:100122800-100126000 Weak transcription Duodenum Mucosa Duodenum
18 chr3:100122800-100126200 Weak transcription Primary hematopoietic stem cells blood
19 chr3:100122800-100126400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr3:100122800-100127000 Weak transcription Pancreas Pancrea
21 chr3:100122800-100129800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:100122800-100131600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:100123000-100129000 Weak transcription NHLF lung
24 chr3:100123000-100131600 Weak transcription Fetal Heart heart
25 chr3:100123000-100131600 Weak transcription HSMM muscle
26 chr3:100123000-100131800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:100123000-100132600 Weak transcription H9 Cell Line embryonic stem cell
28 chr3:100123000-100133600 Weak transcription Stomach Smooth Muscle stomach
29 chr3:100123200-100126000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr3:100123200-100126000 Weak transcription Fetal Lung lung
31 chr3:100123200-100127000 Weak transcription H1 Cell Line embryonic stem cell
32 chr3:100123200-100127000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:100123200-100127000 Weak transcription Ovary ovary
34 chr3:100123200-100130200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:100123200-100133600 Weak transcription A549 lung
36 chr3:100123200-100135400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr3:100123400-100126000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:100123400-100127000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr3:100123400-100127000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr3:100123400-100130200 Weak transcription K562 blood
41 chr3:100123400-100132000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr3:100123400-100132000 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr3:100123400-100132000 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr3:100123600-100124800 Enhancers HepG2 liver
45 chr3:100123600-100126400 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr3:100123600-100126800 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr3:100123600-100126800 Enhancers Liver Liver
48 chr3:100124200-100124800 Enhancers Dnd41 blood
49 chr3:100124200-100126800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr3:100124200-100143600 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015