Variant report
Variant | rs9821702 |
---|---|
Chromosome Location | chr3:24983149-24983150 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:24976191..24978816-chr3:24982389..24985346,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs13324062 | 0.85[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs17015464 | 0.85[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs17015506 | 0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs17015525 | 0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56099058 | 0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6808962 | 0.89[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs9842866 | 0.91[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9842906 | 0.89[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs9860311 | 0.98[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv589953 | chr3:24909003-25004804 | Enhancers Weak transcription Bivalent Enhancer Active TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
2 | nsv876630 | chr3:24911917-25066711 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | nsv834644 | chr3:24936987-25112610 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
4 | nsv460482 | chr3:24966768-25071616 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
5 | nsv589954 | chr3:24966768-25071616 | Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
6 | nsv1008974 | chr3:24968434-24992497 | Weak transcription Enhancers Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:24979200-24998400 | Weak transcription | Right Atrium | heart |