The 2.0 version of rSNPBase

Variant report

Variant rs9825183
Chromosome Location chr3:47660705-47660706
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47626200-47698600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr3:47626400-47680600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr3:47626600-47688600 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr3:47626600-47699800 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr3:47626800-47680800 Strong transcription Primary T cells fromperipheralblood blood
6 chr3:47632400-47660800 Weak transcription Esophagus oesophagus
7 chr3:47634200-47661000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
8 chr3:47635000-47686800 Strong transcription Dnd41 blood
9 chr3:47636800-47672800 Weak transcription Small Intestine intestine
10 chr3:47637200-47665000 Strong transcription Primary T cells from cord blood blood
11 chr3:47638000-47681200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr3:47638200-47665800 Strong transcription H1 Cell Line embryonic stem cell
13 chr3:47639200-47675800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr3:47643600-47684800 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr3:47643800-47666400 Strong transcription iPS-18 Cell Line embryonic stem cell
16 chr3:47644200-47676000 Strong transcription Primary monocytes fromperipheralblood blood
17 chr3:47644400-47664600 Strong transcription Duodenum Mucosa Duodenum
18 chr3:47644600-47663800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr3:47645200-47663200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr3:47645400-47663600 Strong transcription HepG2 liver
21 chr3:47645800-47664600 Strong transcription Primary hematopoietic stem cells blood
22 chr3:47646600-47666600 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr3:47648000-47670600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr3:47651800-47660800 Weak transcription Gastric stomach
25 chr3:47651800-47661000 Weak transcription Colonic Mucosa Colon
26 chr3:47651800-47666800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr3:47653400-47660800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr3:47653400-47661600 Strong transcription Primary T killer memory cells from peripheral blood blood
29 chr3:47653400-47678200 Strong transcription Fetal Intestine Large intestine
30 chr3:47653800-47664000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:47654200-47672400 Weak transcription NHLF lung
32 chr3:47654400-47660800 Weak transcription Right Ventricle heart
33 chr3:47654400-47707600 Weak transcription Stomach Mucosa stomach
34 chr3:47655000-47681000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:47655000-47681600 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr3:47655400-47660800 Weak transcription Pancreas Pancrea
37 chr3:47655400-47666400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:47655400-47676600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr3:47655600-47663400 Weak transcription Psoas Muscle Psoas
40 chr3:47655600-47663800 Strong transcription Fetal Lung lung
41 chr3:47655600-47677000 Strong transcription Primary B cells from cord blood blood
42 chr3:47655600-47684600 Strong transcription Liver Liver
43 chr3:47655800-47661200 Strong transcription Brain Germinal Matrix brain
44 chr3:47655800-47686800 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr3:47655800-47698800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr3:47655800-47765600 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr3:47656000-47660800 Weak transcription Colon Smooth Muscle Colon
48 chr3:47656000-47662400 Strong transcription Placenta Amnion Placenta Amnion
49 chr3:47656000-47666600 Strong transcription GM12878-XiMat blood
50 chr3:47656000-47669000 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015