The 2.0 version of rSNPBase

Variant report

Variant rs9835581
Chromosome Location chr3:179382852-179382853
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372200-179383800 Weak transcription Esophagus oesophagus
2 chr3:179372600-179383800 Weak transcription HSMM muscle
3 chr3:179372600-179384200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:179372600-179403200 Weak transcription Primary B cells from cord blood blood
5 chr3:179372600-179408400 Weak transcription Fetal Intestine Small intestine
6 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
7 chr3:179373000-179383400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr3:179373000-179383800 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:179373200-179383600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr3:179373200-179383800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:179373200-179383800 Weak transcription Fetal Brain Male brain
12 chr3:179373200-179384200 Weak transcription NHLF lung
13 chr3:179374600-179408000 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr3:179374800-179384000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr3:179375000-179389200 Weak transcription Hela-S3 cervix
16 chr3:179376000-179384200 Weak transcription Fetal Muscle Trunk muscle
17 chr3:179376600-179384000 Weak transcription Fetal Stomach stomach
18 chr3:179376600-179400800 Weak transcription Dnd41 blood
19 chr3:179376800-179383800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:179376800-179383800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr3:179377000-179383800 Enhancers Skeletal Muscle Male skeletal muscle
22 chr3:179377000-179384000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr3:179377000-179384000 Weak transcription Stomach Smooth Muscle stomach
24 chr3:179377200-179383800 Enhancers Skeletal Muscle Female skeletal muscle
25 chr3:179379200-179385200 Enhancers Fetal Heart heart
26 chr3:179379800-179383800 Weak transcription Ovary ovary
27 chr3:179380000-179383800 Weak transcription Fetal Brain Female brain
28 chr3:179380200-179383800 Weak transcription H1 Cell Line embryonic stem cell
29 chr3:179380200-179383800 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr3:179380400-179383800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr3:179380400-179383800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr3:179380400-179383800 Weak transcription Fetal Lung lung
33 chr3:179380400-179384400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:179380600-179383800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr3:179380600-179383800 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr3:179380600-179383800 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr3:179380600-179418800 Weak transcription Primary T cells fromperipheralblood blood
38 chr3:179380800-179383800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:179380800-179383800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr3:179381000-179383200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr3:179381200-179383800 Weak transcription Brain Anterior Caudate brain
42 chr3:179381200-179383800 Weak transcription Brain Hippocampus Middle brain
43 chr3:179381400-179383600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr3:179381400-179384000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr3:179381600-179383800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr3:179381600-179384000 Weak transcription Brain Cingulate Gyrus brain
47 chr3:179381600-179384200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:179381800-179383000 Weak transcription Brain Substantia Nigra brain
49 chr3:179381800-179383400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr3:179381800-179383600 Enhancers HepG2 liver

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Last update: Aug 31, 2015